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SCNpilot_cont_500_bf_scaffold_13573

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13573_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..421)
DNA (420bp) protein (140aa)
periplasmic alpha-galactoside-binding protein n=1 Tax=Kaistia granuli RepID=UPI0003781025
Periplasmic alpha-galactoside-binding protein {ECO:0000313|EMBL:KFL28000.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
agpA; alpha-galactoside ABC transporter, substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_13573_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(908..1735)
DNA (828bp) protein (276aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VVA2_RHILT
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJC76763.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_13573_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1843..2739
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003818F6E
Uncharacterized protein {ECO:0000313|EMBL:ENN88768.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
phytanoyl-CoA dioxygenase
SCNpilot_cont_500_bf_scaffold_13573_4
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2897..4096)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RGZ3_9ACTO rbh
ABC transporter; K02004 putative ABC transport system permease protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEP70342.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
SCNpilot_cont_500_bf_scaffold_13573_5
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4093..4779)
DNA (687bp) protein (229aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BK24_SANKS
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:ACZ22433.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_cont_500_bf_scaffold_13573_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4776..5420)
DNA (645bp) protein (215aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F146_VERMA
peptidoglycan-binding domain 1 protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:AEB42700.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
SCNpilot_cont_500_bf_scaffold_13573_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5404..6153)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000368562C
putative peptidoglycan binding domain 1
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ACU69956.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_500_bf_scaffold_13573_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6150..6620)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VSE1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ39732.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_13573_9
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6734..7945)
DNA (1212bp) protein (404aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI0003606B8C rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_13573_10
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7942..8598)
DNA (657bp) protein (219aa)
Two component transcriptional regulator n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RGJ4_MYCPH rbh
Two component transcriptional regulator {ECO:0000313|EMBL:EID10247.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
two component transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_13573_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8810..9031
DNA (222bp) protein (74aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V212_9BRAD
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EFI53742.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
PAS/PAC sensor hybrid histidine kinase
Displaying 11 items

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