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SCNpilot_cont_500_bf_scaffold_13633

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13633_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..162)
DNA (162bp) protein (54aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5C044
SCNpilot_cont_500_bf_scaffold_13633_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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477..671
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO54142.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SCNpilot_cont_500_bf_scaffold_13633_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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697..1227
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A4D8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54143.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_13633_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1227..1403
DNA (177bp) protein (59aa)
Transcriptional regulator of Cro/CI family {ECO:0000313|EMBL:GAO54144.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SCNpilot_cont_500_bf_scaffold_13633_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1727..2239
DNA (513bp) protein (171aa)
50S ribosomal protein L10 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL10_NOVAD
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
SCNpilot_cont_500_bf_scaffold_13633_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2306..2683
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL7_NOVAD
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
SCNpilot_cont_500_bf_scaffold_13633_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2895..4223)
DNA (1329bp) protein (443aa)
DNA-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B567A5 rbh
Magnesium and cobalt efflux protein corC {ECO:0000313|EMBL:GAO54148.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein; K03699 putative hemolysin rbh
SCNpilot_cont_500_bf_scaffold_13633_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4385..4930
DNA (546bp) protein (182aa)
OmpA/MotB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3G5_NOVAD rbh
Outer membrane protein A {ECO:0000313|EMBL:GAO54149.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
OmpA/MotB rbh
Displaying 8 items

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