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SCNpilot_cont_500_bf_scaffold_13990

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13990_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..443)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92002.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2878)
SCNpilot_cont_500_bf_scaffold_13990_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(440..1684)
DNA (1245bp) protein (415aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR2_9GAMM rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EIL92003.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methyltransferase, cyclopropane fatty acid synthase rbh
SCNpilot_cont_500_bf_scaffold_13990_3
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2392..3585)
DNA (1194bp) protein (398aa)
Amine oxidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VII3_9GAMM
putative NAD/FAD-binding protein rbh
NODE_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96819.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
SCNpilot_cont_500_bf_scaffold_13990_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3589..3885)
DNA (297bp) protein (99aa)
Fatty acid desaturase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR5_9GAMM
Fatty acid desaturase {ECO:0000313|EMBL:EIL92006.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fatty-acid desaturase
SCNpilot_cont_500_bf_scaffold_13990_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4717..6129)
DNA (1413bp) protein (471aa)
Deoxyribodipyrimidine photo lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR8_9GAMM rbh
Deoxyribodipyrimidine photo lyase {ECO:0000313|EMBL:EIL92009.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
deoxyribodipyrimidine photolyase
SCNpilot_cont_500_bf_scaffold_13990_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6152..6814)
DNA (663bp) protein (221aa)
Anti-ECFsigma factor ChrR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR9_9GAMM
Anti-ECFsigma factor ChrR {ECO:0000313|EMBL:EIL92010.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
anti-ECFsigma factor, ChrR rbh
SCNpilot_cont_500_bf_scaffold_13990_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6811..7101)
DNA (291bp) protein (97aa)
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS0_9GAMM
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL92011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
SCNpilot_cont_500_bf_scaffold_13990_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7573..8082)
DNA (510bp) protein (170aa)
RNA polymerase sigma factor RpoD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV09_9GAMM
RNA polymerase, sigma 70 subunit, RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 8 items

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