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SCNpilot_cont_500_bf_scaffold_11161

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11161_1
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..347)
DNA (345bp) protein (115aa)
cytochrome c family protein
Doubled CXXCH motif family protein id=2739200 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Cytochrome C {ECO:0000313|EMBL:EPR11167.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
SCNpilot_cont_500_bf_scaffold_11161_2
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(344..1072)
DNA (729bp) protein (243aa)
Uncharacterized protein n=8 Tax=Sphingomonadaceae RepID=D4YYB7_SPHJU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM68918.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
SCNpilot_cont_500_bf_scaffold_11161_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1072..2982)
DNA (1911bp) protein (637aa)
Putative flavodoxin reductase n=2 Tax=Sphingomonas RepID=M4SAT3_9SPHN rbh
Flavodoxin {ECO:0000313|EMBL:AKH18822.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
putative flavodoxin reductase rbh
SCNpilot_cont_500_bf_scaffold_11161_4
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3006..3326)
DNA (321bp) protein (107aa)
hypothetical protein
Uncharacterized protein id=2739185 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Uncharacterized protein {ECO:0000313|EMBL:EPR11164.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
SCNpilot_cont_500_bf_scaffold_11161_5
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3386..3607)
DNA (222bp) protein (74aa)
hypothetical protein
Uncharacterized protein id=2739181 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Uncharacterized protein {ECO:0000313|EMBL:EPR11163.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
SCNpilot_cont_500_bf_scaffold_11161_6
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3604..4083)
DNA (480bp) protein (160aa)
MerR family transcriptional regulator; K13638 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA rbh
MerR regulatory family protein id=2739176 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
MerR family transcriptional regulator {ECO:0000313|EMBL:EQB31169.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
SCNpilot_cont_500_bf_scaffold_11161_7
unknown

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4306..4530
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_11161_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4752..5114
DNA (363bp) protein (121aa)
hypothetical protein
Uncharacterized protein id=2739170 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Uncharacterized protein {ECO:0000313|EMBL:KFD26217.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_500_bf_scaffold_11161_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5191..5448
DNA (258bp) protein (86aa)
hypothetical protein
Uncharacterized protein id=2739167 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Uncharacterized protein {ECO:0000313|EMBL:KFD26216.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_500_bf_scaffold_11161_10
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5512..6411
DNA (900bp) protein (300aa)
Cation resistance protein CzcC n=6 Tax=Sphingomonadaceae RepID=D4YYC5_SPHJU rbh
cation resistance protein CzcC; K15725 cobalt-zinc-cadmium resistance protein CzcC rbh
Transporter {ECO:0000313|EMBL:EPR11157.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
Displaying 10 items

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