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SCNpilot_cont_500_bf_scaffold_11413

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11413_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..431)
DNA (429bp) protein (143aa)
Putative serine/threonine protein kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRS4_9GAMM
Putative serine/threonine protein kinase {ECO:0000313|EMBL:EIM02166.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
serine/threonine protein kinase
SCNpilot_cont_500_bf_scaffold_11413_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428..649)
DNA (222bp) protein (74aa)
FHA domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKF7_9GAMM
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:AGG90163.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_11413_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1014..1508)
DNA (495bp) protein (165aa)
L-asparaginase/GlutRNAGln amidotransferase subunit D (EC:3.5.1.1)
Putative asparaginase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT97_9GAMM
Asparaginase {ECO:0000313|EMBL:AHX14311.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_500_bf_scaffold_11413_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1722..2510)
DNA (789bp) protein (263aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBW6_9GAMM
acyl-CoA dehydrogenase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_11413_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2618..3280)
DNA (663bp) protein (221aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T9_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIL93780.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_11413_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3378..3794
DNA (417bp) protein (139aa)
putative acetyltransferase; K03829 putative acetyltransferase [EC:2.3.1.-]
Acetyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZ93_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL92534.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_11413_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3794..4489
DNA (696bp) protein (232aa)
Putative acetyltransferase id=1262168 bin=GWE1_Burkholderiales_65_30 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
acetyltransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_cont_500_bf_scaffold_11413_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4493..4855)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EFE893
Membrane protein {ECO:0000313|EMBL:AIF49136.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_11413_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4852..5454)
DNA (603bp) protein (201aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
NAD(P)H dehydrogenase (quinone) n=1 Tax=Rhodanobacter denitrificans RepID=M4NBX1_9GAMM
NAD(P)H:quinone oxidoreductase, type IV
SCNpilot_cont_500_bf_scaffold_11413_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5677..6735
DNA (1059bp) protein (353aa)
hypothetical protein (EC:3.1.-.-)
UPF0761 membrane protein rbn n=1 Tax=Rhodanobacter denitrificans RepID=I4WG37_9GAMM
UPF0761 membrane protein R2APBS1_0944 {ECO:0000256|HAMAP-Rule:MF_00672}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_11413_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6732..7205
DNA (474bp) protein (158aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKN9_9GAMM
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:EIM00031.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
thiol-disulfide isomerase-like thioredoxin
SCNpilot_cont_500_bf_scaffold_11413_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7205..7471
DNA (267bp) protein (89aa)
Acylphosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T3_9GAMM
acylphosphatase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_11413_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7522..8601)
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T1_9GAMM rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bacterial peptide chain release factor 1 (bRF-1) rbh
SCNpilot_cont_500_bf_scaffold_11413_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8672..9034)
DNA (363bp) protein (121aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKN5_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_11413_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9024..9824)
DNA (801bp) protein (267aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutamyl-tRNA reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBS6_9GAMM
SCNpilot_cont_500_bf_scaffold_11413_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9878..11683
DNA (1806bp) protein (602aa)
Flp pilus assembly protein TadD n=1 Tax=Rhodanobacter denitrificans RepID=M4NK11_9GAMM rbh
Flp pilus assembly protein TadD rbh
Flp pilus assembly protein TadD {ECO:0000313|EMBL:AGG88111.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_11413_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11680..12285
DNA (606bp) protein (202aa)
Outer-membrane lipoprotein LolB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ25_9GAMM rbh
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
outer membrane lipoprotein LolB
SCNpilot_cont_500_bf_scaffold_11413_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12341..13720
DNA (1380bp) protein (460aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKN2_9GAMM
SCNpilot_cont_500_bf_scaffold_11413_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13878..14711
DNA (834bp) protein (278aa)
Ribose-phosphate pyrophosphokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S6_9GAMM
ribose-phosphate pyrophosphokinase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 19 items

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