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SCNpilot_cont_500_bf_scaffold_12008

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_12008_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(116..718)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F4U3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06871.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCNpilot_cont_500_bf_scaffold_12008_2
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(734..1480)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Acidovorax sp. (strain JS42) RepID=A1W7W3_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ91511.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
SCNpilot_cont_500_bf_scaffold_12008_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1467..2366)
DNA (900bp) protein (300aa)
TniB family protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5FB08_9RHIZ rbh
TniB family protein {ECO:0000313|EMBL:CCV09116.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
TniB family protein rbh
SCNpilot_cont_500_bf_scaffold_12008_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2363..3958)
DNA (1596bp) protein (532aa)
Integrase, catalytic region n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EYS5_9RHIZ
Integrase, catalytic region {ECO:0000313|EMBL:CCV09115.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
integrase catalytic subunit
SCNpilot_cont_500_bf_scaffold_12008_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3955..4569)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5C5_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM41450.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_cont_500_bf_scaffold_12008_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4802..5266
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZK3_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD89433.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_12008_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5263..5778
DNA (516bp) protein (172aa)
Protease TraF n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QEY6_9BRAD
Protease TraF {ECO:0000313|EMBL:EGP10326.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12008_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5781..6599
DNA (819bp) protein (273aa)
Lytic transglycosylase catalytic n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV59_CAUSK
lytic transglycosylase catalytic subunit
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ABZ72949.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_500_bf_scaffold_12008_9
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6664..7623)
DNA (960bp) protein (320aa)
UPI0003CE9072 related cluster n=1 Tax=unknown RepID=UPI0003CE9072
Uncharacterized protein {ECO:0000313|EMBL:ESY65569.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
transposase of ISAli15, IS66 family. ORFC
SCNpilot_cont_500_bf_scaffold_12008_10
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8195..8548)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S680_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89707.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
transposase
SCNpilot_cont_500_bf_scaffold_12008_11
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8545..9465)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S679_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD89706.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12008_12
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10081..11874
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7K7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS51277.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12008_13
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12237..12494
DNA (258bp) protein (86aa)
UPI0003CECD24 related cluster n=1 Tax=unknown RepID=UPI0003CECD24
Transposase IS110 {ECO:0000313|EMBL:ESW65075.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
transposase; K07486 transposase
Displaying 13 items

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