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SCNpilot_cont_500_bf_scaffold_12444

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_12444_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1199)
DNA (1197bp) protein (399aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
glnA1; glutamine synthetase I (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWH1_LEIAQ
SCNpilot_cont_500_bf_scaffold_12444_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1337..1762
DNA (426bp) protein (142aa)
RDD family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5X9_LEIAQ
RDD family protein {ECO:0000313|EMBL:ERK72878.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12444_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1838..2542)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TDV5_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72877.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_12444_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2586..2969)
DNA (384bp) protein (128aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Lipoyl synthase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVT0_LEIAQ
lipoyl synthase
SCNpilot_cont_500_bf_scaffold_12444_5
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2963..3469)
DNA (507bp) protein (169aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
Lipoyl synthase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P833_LEIXC
lipoyl synthase
SCNpilot_cont_500_bf_scaffold_12444_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3466..4065)
DNA (600bp) protein (200aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|SAAS:SAAS00218471}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|SAAS:SAAS00218470};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATC
lipB; lipoate-protein ligase B (EC:2.3.1.-); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
Octanoyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCA0_LEIAQ rbh
SCNpilot_cont_500_bf_scaffold_12444_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4206..5744
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWG6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK72874.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12444_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5751..7331)
DNA (1581bp) protein (527aa)
dihydrolipoamide succinyltransferase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036A731D rbh
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:KIC57276.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
dihydrolipoamide acetyltransferase rbh
SCNpilot_cont_500_bf_scaffold_12444_9
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7328..8713)
DNA (1386bp) protein (462aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
Dihydrolipoyl dehydrogenase n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AFG3_LEIXX rbh
SCNpilot_cont_500_bf_scaffold_12444_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8723..10210)
DNA (1488bp) protein (496aa)
Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Cytosol aminopeptidase family, catalytic domain protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RWA0_LEIAQ rbh
leucyl aminopeptidase rbh
SCNpilot_cont_500_bf_scaffold_12444_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10315..11238
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SWK4_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK69663.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_12444_12
unknown

Not on your lists

comp(11545..11673)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_12444_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11922..12593
DNA (672bp) protein (224aa)
Transporter, major facilitator family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T4L6_LEIAQ
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK69662.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
major facilitator superfamily permease
Displaying 13 items

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