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SCNpilot_cont_500_bf_scaffold_12929

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_12929_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..559)
DNA (558bp) protein (186aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NJU7_9GAMM
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_12929_2
unknown

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1461..2228
DNA (768bp) protein (256aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_12929_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2072..2773)
DNA (702bp) protein (234aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NDT2_9GAMM
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component {ECO:0000313|EMBL:AGG88042.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_12929_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2790..3326
DNA (537bp) protein (179aa)
Acyl-CoA thioesterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ12_9GAMM
lysophospholipase L1-like esterase
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:AGG88043.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_12929_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3414..4145
DNA (732bp) protein (244aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ11_9GAMM rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_12929_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4162..5175
DNA (1014bp) protein (338aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZH2_9GAMM
Signal transduction histidine kinase {ECO:0000313|EMBL:EIL92613.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_12929_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5214..5480)
DNA (267bp) protein (89aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Dyella japonica RepID=UPI0002FD41AD
3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit
SCNpilot_cont_500_bf_scaffold_12929_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5441..6505)
DNA (1065bp) protein (355aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Acetate CoA-transferase YdiF n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8N5_9GAMM
3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit
SCNpilot_cont_500_bf_scaffold_12929_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6674..7045
DNA (372bp) protein (124aa)
CopY family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV44_9GAMM
putative transcriptional regulator
CopY family transcriptional regulator {ECO:0000313|EMBL:EIL91085.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_12929_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7032..8567
DNA (1536bp) protein (512aa)
Antirepressor regulating drug resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NET1_9GAMM rbh
antirepressor regulating drug resistance protein rbh
Antirepressor regulating drug resistance protein {ECO:0000313|EMBL:AGG88048.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_12929_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8667..9239
DNA (573bp) protein (191aa)
Asparaginase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBR6_9GAMM
asparaginase
Asparaginase {ECO:0000313|EMBL:AGG88049.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 11 items

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