ggKbase home page

SCNpilot_cont_500_bf_scaffold_23198

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_23198_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3..1517
DNA (1515bp) protein (505aa)
Methionine--tRNA ligase {ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|SAAS:SAAS00252424};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8I2_9GAMM
SCNpilot_cont_500_bf_scaffold_23198_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1405..1695)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W647_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_23198_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1768..2376
DNA (609bp) protein (203aa)
RnfABCDGE type electron transport complex subunit B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRB2_9GAMM
RnfABCDGE type electron transport complex subunit B {ECO:0000313|EMBL:EIM02004.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
electron transport complex, RnfABCDGE type, B subunit
SCNpilot_cont_500_bf_scaffold_23198_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2373..3011
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18 3.2.2.-) rbh
Endonuclease III n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRB1_9GAMM
SCNpilot_cont_500_bf_scaffold_23198_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3054..3557)
DNA (504bp) protein (168aa)
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWR6_9GAMM
23S RNA-specific pseudouridylate synthase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_23198_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3955..4434
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWR7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89525.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_23198_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4493..4927
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD59_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
SCNpilot_cont_500_bf_scaffold_23198_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4974..5831)
DNA (858bp) protein (286aa)
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS0_9GAMM rbh
serine/threonine protein kinase involved in cell cycle control rbh
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:AGG89528.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_23198_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5905..6429)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W481_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94272.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
luciferase family oxidoreductase, group 1
Displaying 9 items

View Taxonomy