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SCNpilot_cont_500_bf_scaffold_1154

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1154_1
unknown

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_2
unknown

Not on your lists

comp(137..364)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_3
unknown

Not on your lists

comp(364..846)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_4
unknown

Not on your lists

comp(839..1264)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_5
unknown

Not on your lists

comp(1261..1359)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_6
unknown

Not on your lists

comp(1359..1565)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_7

Not on your lists

comp(1562..2011)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035FFFE8
Uncharacterized protein {ECO:0000313|EMBL:KKM98702.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1154_8
unknown

Not on your lists

comp(2008..2226)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_9
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2223..3122)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A8CC4
Bacteriophage protein gp37 {ECO:0000313|EMBL:ESS41354.1}; TaxID=1396830 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia KC-01.;"
Gp37Gp68 family protein
SCNpilot_cont_500_bf_scaffold_1154_10
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3122..4831)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AC15_9MICO
Uncharacterized protein {ECO:0000313|EMBL:BAQ16966.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1154_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4828..5205)
DNA (378bp) protein (126aa)
Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JY77_HYPDA
Strain MEJ076 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03681.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1154_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5205..5627)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:BAR61860.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCNpilot_cont_500_bf_scaffold_1154_13
unknown

Not on your lists

comp(5624..5866)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_14
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5863..6588)
DNA (726bp) protein (242aa)
Exonuclease RNase T and DNA polymerase III; K10857 exodeoxyribonuclease X [EC:3.1.11.-]
Exonuclease RNase T and DNA polymerase III n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CKU2_9RHOB
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:EFO30141.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
SCNpilot_cont_500_bf_scaffold_1154_15
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..8021)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NE65_RHISP rbh
Uncharacterized protein {ECO:0000313|EMBL:CCF19096.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1154_16
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8033..9052)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WVE0_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS12944.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_1154_17
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9062..9970)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237DEB9
Uncharacterized protein {ECO:0000313|EMBL:GAC81668.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1154_18
unknown

Not on your lists

comp(9974..10078)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_19
unknown

Not on your lists

comp(10078..10191)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_20
unknown

Not on your lists

comp(10188..10415)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_21
unknown

Not on your lists

comp(10415..10579)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_22
unknown

Not on your lists

comp(10576..10809)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_23
unknown

Not on your lists

comp(10806..11048)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_24
unknown

Not on your lists

comp(11100..11501)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_25
unknown

Not on your lists

comp(11498..11686)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_26
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

11837..12700
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036E68CE
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
SCNpilot_cont_500_bf_scaffold_1154_27
unknown

Not on your lists

12697..12909
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_28
unknown

Not on your lists

13349..13537
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_29
unknown

Not on your lists

comp(14041..14460)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1154_30
unknown

Not on your lists

comp(14457..14864)
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying items 1-30 of 86 in total

View Taxonomy