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SCNpilot_cont_500_bf_scaffold_1557

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1557_1
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..748
DNA (747bp) protein (249aa)
Conjugation TrbI family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT7_GLUDA
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:ACI52565.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_500_bf_scaffold_1557_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

760..1020
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:ETR77818.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1557_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(993..1904)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037D7E22
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR77817.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1557_4
unknown

Not on your lists

comp(1965..2342)
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1557_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2357..3640)
DNA (1284bp) protein (428aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR0_9GAMM
uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1557_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3637..4167)
DNA (531bp) protein (177aa)
Copper-resistance protein, CopA family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW6_9GAMM
Copper-resistance protein, CopA family protein {ECO:0000313|EMBL:EIL89957.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copper-resistance protein, CopA family
SCNpilot_cont_500_bf_scaffold_1557_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4139..5299)
DNA (1161bp) protein (387aa)
copper oxidase n=1 Tax=Dyella ginsengisoli RepID=UPI000348EE6E
Copper resistance transmembrane protein {ECO:0000313|EMBL:EIL90332.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
copper-resistance protein, CopA family
SCNpilot_cont_500_bf_scaffold_1557_8
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5418..5993)
DNA (576bp) protein (192aa)
RNA polymerase sigma factor cnrH n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXW3_BREDI
RNA polymerase sigma factor cnrH {ECO:0000313|EMBL:GAM97426.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_1557_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5990..6433)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H529_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37950.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1557_10
unknown

Not on your lists

comp(6430..6711)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1557_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6861..7463
DNA (603bp) protein (201aa)
Cytochrome C n=1 Tax=Sphingobium baderi LL03 RepID=T0I1N1_9SPHN
Cytochrome C {ECO:0000313|EMBL:KEZ15191.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
cytochrome c family protein
SCNpilot_cont_500_bf_scaffold_1557_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7476..7796
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NM93_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1557_13
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..8121)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUP2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE10180.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1557_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8223..10583
DNA (2361bp) protein (787aa)
heavy-metal transporting P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMX1_9BRAD
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKS42139.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_1557_15
unknown

Not on your lists

comp(10728..11021)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1557_16
unknown

Not on your lists

11175..11663
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1557_17
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11752..12198
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWA5_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB64714.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_500_bf_scaffold_1557_18
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12322..13620
DNA (1299bp) protein (433aa)
Cation transporter n=1 Tax=Asaia sp. SF2.1 RepID=V8A3Q9_9PROT
Heavy metal/cation efflux pump CzcB/HlyD {ECO:0000313|EMBL:GAN56555.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;"
CzcB family heavy metal RND efflux membrane fusion protein
SCNpilot_cont_500_bf_scaffold_1557_19
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13617..16733
DNA (3117bp) protein (1039aa)
Heavy metal efflux pump CzcA n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7ERA5_PSEST
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:KIL99076.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
czcA; heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
SCNpilot_cont_500_bf_scaffold_1557_20
unknown

Not on your lists

comp(16791..17039)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1557_21
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17109..18998
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Vibrio crassostreae RepID=UPI00031CD1D6 rbh
putative ATP-dependent endonuclease of the OLD family rbh
Putative ATP-dependent endonuclease of the OLD family {ECO:0000313|EMBL:AGS39465.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zancles 7-ME.;"
SCNpilot_cont_500_bf_scaffold_1557_22
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19014..20363
DNA (1350bp) protein (450aa)
Metallophosphoesterase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLD7_9GAMM rbh
Metallophosphoesterase {ECO:0000313|EMBL:EAR23125.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
metallophosphoesterase rbh
SCNpilot_cont_500_bf_scaffold_1557_23
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20367..23912
DNA (3546bp) protein (1182aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLD8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR23126.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1557_24
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23966..29818)
DNA (5853bp) protein (1951aa)
DNA helicase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002898961 rbh
DNA helicase related protein {ECO:0000313|EMBL:GAO54977.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
DNA helicase rbh
SCNpilot_cont_500_bf_scaffold_1557_25
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30682..31227)
DNA (546bp) protein (182aa)
Putative resolvase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AHE4_AZOBR
putative resolvase
Uncharacterized protein {ECO:0000313|EMBL:AIB12682.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCNpilot_cont_500_bf_scaffold_1557_26
unknown

Not on your lists

31405..31770
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1557_27
unknown

Not on your lists

32264..32542
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1557_28
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32568..33335
DNA (768bp) protein (256aa)
Transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTV5_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KCZ48080.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
slmA; transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1557_29
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33436..34737
DNA (1302bp) protein (434aa)
Sugar and other transporter family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV22_BREDI rbh
Sugar and other transporter family protein {ECO:0000313|EMBL:EGF96451.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_1557_30
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34750..35634
DNA (885bp) protein (295aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL8_9SPHN
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying items 1-30 of 43 in total

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