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SCNpilot_cont_500_bf_scaffold_1734

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1734_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..364
DNA (363bp) protein (121aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F4_9GAMM
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EIL93295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH:flavin oxidoreductase
SCNpilot_cont_500_bf_scaffold_1734_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(449..1276)
DNA (828bp) protein (276aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F6_9GAMM
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EIL93297.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
SCNpilot_cont_500_bf_scaffold_1734_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1245..1817)
DNA (573bp) protein (191aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK7_9GAMM
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EIL87398.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
SCNpilot_cont_500_bf_scaffold_1734_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2037..2954)
DNA (918bp) protein (306aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F7_9GAMM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIL93298.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_1734_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2951..3508)
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) rbh
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP6_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIL93299.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_1734_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3505..4395)
DNA (891bp) protein (297aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24) rbh
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP5_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_1734_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4392..5441)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) rbh
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP4_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_1734_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5554..6798
DNA (1245bp) protein (415aa)
cystathionine beta-lyase/cystathionine gamma-synthase (EC:4.4.1.1) rbh
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:AGG87744.1}; EC=4.4.1.1 {ECO:0000313|EMBL:AGG87744.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB14_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_1734_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6887..7687
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJM5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87416.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
methyltransferase, FkbM family
SCNpilot_cont_500_bf_scaffold_1734_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7719..8795
DNA (1077bp) protein (359aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIV7_9GAMM rbh
nucleoside-diphosphate-sugar epimerase rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG87746.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1734_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8792..10750
DNA (1959bp) protein (653aa)
Glycosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJM7_9GAMM rbh
Glycosyltransferase {ECO:0000313|EMBL:EIL87418.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1734_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10764..11096
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJM8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87419.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1734_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11096..12250
DNA (1155bp) protein (385aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJM9_9GAMM rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL87420.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative glycosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1734_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12356..13393
DNA (1038bp) protein (346aa)
Putative acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAY0_9GAMM rbh
putative acyltransferase rbh
Putative acyltransferase {ECO:0000313|EMBL:AGG87750.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1734_15
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13634..13951
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV53_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC18695.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_500_bf_scaffold_1734_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14659..16023)
DNA (1365bp) protein (455aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJT0_9GAMM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIL87471.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component rbh
SCNpilot_cont_500_bf_scaffold_1734_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16013..16765)
DNA (753bp) protein (251aa)
ABC transporter system integral membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJS9_9GAMM rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component rbh
SCNpilot_cont_500_bf_scaffold_1734_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17401..17865)
DNA (465bp) protein (155aa)
Putative lipoprotein NlpE involved in copper resistance n=1 Tax=Rhodanobacter denitrificans RepID=M4NE29_9GAMM
putative lipoprotein NlpE involved in copper resistance
Putative lipoprotein NlpE involved in copper resistance {ECO:0000313|EMBL:AGG87753.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1734_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17913..19274)
DNA (1362bp) protein (454aa)
phosphomannomutase (EC:5.4.2.8) rbh
Phosphoglucomutase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJS7_9GAMM rbh
Phosphoglucomutase {ECO:0000313|EMBL:EIL87468.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_1734_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19295..20236)
DNA (942bp) protein (314aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTZ0_9GAMM
electron transfer flavoprotein, alpha subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_1734_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20316..21062)
DNA (747bp) protein (249aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1H7_9GAMM
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EIL93318.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
electron transfer flavoprotein, beta subunit
SCNpilot_cont_500_bf_scaffold_1734_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21350..22252
DNA (903bp) protein (301aa)
Family 2 glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSW6_9GAMM rbh
putative glycosyltransferase rbh
Putative glycosyltransferase {ECO:0000313|EMBL:AGG87757.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1734_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22268..23200
DNA (933bp) protein (311aa)
Putative glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NE33_9GAMM rbh
putative glycosyltransferase rbh
Putative glycosyltransferase {ECO:0000313|EMBL:AGG87758.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1734_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23292..24899)
DNA (1608bp) protein (536aa)
Flavoprotein-ubiquinone oxidoreductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTZ5_9GAMM rbh
Flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:EIL90686.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
flavin-dependent dehydrogenase
Displaying 24 items

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