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SCNpilot_cont_500_bf_scaffold_1833

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1833_1
unknown

Not on your lists

152..946
DNA (795bp) protein (265aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1833_2
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

943..2880
DNA (1938bp) protein (646aa)
Molecular chaperone-like protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ75_NITHN
Molecular chaperone-like protein
Molecular chaperone-like protein {ECO:0000313|EMBL:ADE16089.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_cont_500_bf_scaffold_1833_3
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2896..3336)
DNA (441bp) protein (147aa)
Molecular chaperone GrpE (Heat shock protein) {ECO:0000313|EMBL:KJE20488.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
SCNpilot_cont_500_bf_scaffold_1833_4
Gordonia amicalis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3582..4478)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Gordonia amicalis NBRC 100051 = JCM 11271 RepID=L7L1V1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC55070.1}; TaxID=1220574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amicalis NBRC 100051 = JCM 11271.;"
site-specific recombinase
SCNpilot_cont_500_bf_scaffold_1833_5
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4966..5436
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381FE2D
Oxidoreductase {ECO:0000313|EMBL:EWT00667.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
globin; K06886 hemoglobin
SCNpilot_cont_500_bf_scaffold_1833_6
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5592..8651
DNA (3060bp) protein (1020aa)
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00034968F4 rbh
Transposase {ECO:0000313|EMBL:BAE46316.1}; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NBRC 100887).;"
tnpA; transposase rbh
SCNpilot_cont_500_bf_scaffold_1833_7
unknown

Not on your lists

comp(8660..8908)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1833_8
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9048..9326)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y4B7_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG87171.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
SCNpilot_cont_500_bf_scaffold_1833_9
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9603..10016
DNA (414bp) protein (138aa)
N-acetyltransferase GCN5 n=1 Tax=Glaciibacter superstes RepID=UPI0003B4187B
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADL46698.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_cont_500_bf_scaffold_1833_10
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10145..10867
DNA (723bp) protein (241aa)
haloacid dehalogenase n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00035D606A
Putative haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:KCU98755.1}; TaxID=1194418 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. actinidiae ICMP 9617.;"
Haloacid dehalogenase domain protein hydrolase
SCNpilot_cont_500_bf_scaffold_1833_11
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11045..11638
DNA (594bp) protein (198aa)
recombinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEBBB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC05002.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
resolvase rbh
SCNpilot_cont_500_bf_scaffold_1833_12
unknown

Not on your lists

12125..12223
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1833_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12243..13226)
DNA (984bp) protein (328aa)
Putative NUDIX hydrolase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VWP9_9ACTO
putative NUDIX hydrolase
Putative NUDIX hydrolase {ECO:0000313|EMBL:AGZ40056.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_1833_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13686..15167)
DNA (1482bp) protein (494aa)
Multicopper oxidase type 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6M8_PSEUX
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:AEA28922.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1833_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15181..15405)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6M9_PSEUX
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28923.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1833_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15436..15831)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28924.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1833_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15881..16675)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N1_PSEUX
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:AEA28925.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1833_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16704..18083)
DNA (1380bp) protein (460aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N2_PSEUX rbh
beta-lactamase domain-containing protein rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA28926.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1833_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18119..18433)
DNA (315bp) protein (105aa)
Rhodanese-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N3_PSEUX
Rhodanese-like protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1833_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18548..18817)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28928.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1833_21
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18959..20251)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUJ6_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31525.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCNpilot_cont_500_bf_scaffold_1833_22
unknown

Not on your lists

comp(20860..21486)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1833_23
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21706..22632)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00037288E0
putative plasmid partitioning protein
Putative plasmid partitioning protein {ECO:0000313|EMBL:AEB47989.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
SCNpilot_cont_500_bf_scaffold_1833_24
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22629..23423)
DNA (795bp) protein (265aa)
Putative plasmid partitioning protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FI24_VERMA rbh
putative plasmid partitioning protein; K03496 chromosome partitioning protein rbh
Putative plasmid partitioning protein {ECO:0000313|EMBL:AEB47988.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
SCNpilot_cont_500_bf_scaffold_1833_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23578..24999)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6R0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28782.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_500_bf_scaffold_1833_26
unknown

Not on your lists

comp(25131..25337)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1833_27
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25417..26223)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JYD4_SACES
Uncharacterized protein {ECO:0000313|EMBL:KJK47850.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1833_28
unknown

Not on your lists

comp(26224..26997)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1833_29
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27248..27529
DNA (282bp) protein (94aa)
transcriptional regulator n=1 Tax=Streptomyces sp. AA1529 RepID=UPI0002F96EB2
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
transcription factor WhiB
SCNpilot_cont_500_bf_scaffold_1833_30
unknown

Not on your lists

27526..27759
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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