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SCNpilot_cont_500_bf_scaffold_1888

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1888_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..419
DNA (417bp) protein (139aa)
phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_00495};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Phosphoglycolate phosphatase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=GPH_CAUCR
SCNpilot_cont_500_bf_scaffold_1888_trna_1
unknown

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681..752
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1888_2
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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1434..2633
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae MGH 32 RepID=V3Q5C0_KLEPN rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI04329.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1888_3
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2992..5040
DNA (2049bp) protein (683aa)
UPI0003CE6481 related cluster n=1 Tax=unknown RepID=UPI0003CE6481 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY18277.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1888_4
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5077..5898
DNA (822bp) protein (274aa)
UPI0003CE6481 related cluster n=1 Tax=unknown RepID=UPI0003CE6481
Uncharacterized protein {ECO:0000313|EMBL:ESY18277.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1888_5
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5895..8762
DNA (2868bp) protein (956aa)
UPI0003CF1742 related cluster n=1 Tax=unknown RepID=UPI0003CF1742 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ12680.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
helicase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1888_6
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8743..9705)
DNA (963bp) protein (321aa)
UPI0003CF46DC related cluster n=1 Tax=unknown RepID=UPI0003CF46DC rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY18279.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1888_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9702..11420)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PM4_RHOP5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ06110.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_500_bf_scaffold_1888_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11420..17584)
DNA (6165bp) protein (2055aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PM3_RHOP5 rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ABJ06111.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
DEAD/DEAH box helicase rbh
SCNpilot_cont_500_bf_scaffold_1888_9
unknown

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17913..18551
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1888_10
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18612..18734)
DNA (123bp) protein (41aa)
Transposase (Fragment) n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IG28_9SPHN
Transposase {ECO:0000313|EMBL:EXL04712.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
ISBm1, transposase orfA
SCNpilot_cont_500_bf_scaffold_1888_11
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18809..19144)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003827677
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY30823.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
SCNpilot_cont_500_bf_scaffold_1888_12
candidate division Zixibacteria, Bacteria

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comp(19432..19812)
DNA (381bp) protein (127aa)
id=1250472 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Uncharacterized protein {ECO:0000313|EMBL:EQB63335.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
SCNpilot_cont_500_bf_scaffold_1888_13
unknown

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comp(19815..20060)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1888_14
unknown

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comp(20971..21882)
DNA (912bp) protein (304aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1888_15
unknown

Not on your lists

comp(21875..22147)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1888_16
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22201..22473)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RG94_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJR67290.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
phage-like protein
SCNpilot_cont_500_bf_scaffold_1888_17
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22676..24109)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00036E6333
Phage integrase {ECO:0000313|EMBL:EDP64873.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
integrase family protein
Displaying 18 items

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