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SCNpilot_cont_500_bf_scaffold_1960

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1960_1
unknown

Not on your lists

50..343
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1960_2
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(211..1575)
DNA (1365bp) protein (455aa)
UPI0003D67D3E related cluster n=1 Tax=unknown RepID=UPI0003D67D3E rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI59479.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
transposase rbh
SCNpilot_cont_500_bf_scaffold_1960_3
unknown

Not on your lists

comp(1628..2182)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1960_4
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2484..4124)
DNA (1641bp) protein (547aa)
UPI0003CF2D16 related cluster n=1 Tax=unknown RepID=UPI0003CF2D16 rbh
Recombinase {ECO:0000313|EMBL:ESW93135.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
recombinase rbh
SCNpilot_cont_500_bf_scaffold_1960_5
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4539..5129)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZQ3_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH87040.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1960_6
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5505..5705)
DNA (201bp) protein (67aa)
DNA-binding protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HRY6_9RHIZ
DNA-binding protein {ECO:0000313|EMBL:ESZ66077.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
phage transcriptional regulator, AlpA; K07733 prophage regulatory protein
SCNpilot_cont_500_bf_scaffold_1960_7
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5834..8863)
DNA (3030bp) protein (1010aa)
UPI0003CFD3A8 related cluster n=1 Tax=unknown RepID=UPI0003CFD3A8
Conjugal transfer protein TrbA {ECO:0000313|EMBL:ESZ46854.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
Ti-type conjugative transfer relaxase TraA
SCNpilot_cont_500_bf_scaffold_1960_8
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9036..9362
DNA (327bp) protein (109aa)
UPI0003CF0752 related cluster n=1 Tax=unknown RepID=UPI0003CF0752
Conjugal transfer protein TraD {ECO:0000313|EMBL:ESX49091.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
Conjugal transfer TraD family protein
SCNpilot_cont_500_bf_scaffold_1960_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9301..9594
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003720CD7
Uncharacterized protein {ECO:0000313|EMBL:EKS34570.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Conjugal transfer TraD family protein
SCNpilot_cont_500_bf_scaffold_1960_10
unknown

Not on your lists

9572..9724
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1960_11
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9769..11319)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HTB9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ66607.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
SCNpilot_cont_500_bf_scaffold_1960_12
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11489..12358)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HSE2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ66068.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1960_13
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12351..12974)
DNA (624bp) protein (208aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HPU5_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:ESZ66069.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1960_14
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13156..13626)
DNA (471bp) protein (157aa)
DNA mismatch endonuclease Vsr (EC:3.1.-.-); K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
DNA mismatch repair protein Vsr n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HRR4_9RHIZ
DNA mismatch repair protein Vsr {ECO:0000313|EMBL:ESZ66070.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
SCNpilot_cont_500_bf_scaffold_1960_15
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13704..15308
DNA (1605bp) protein (535aa)
Modification methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
DNA-cytosine methyltransferase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HNU8_9RHIZ rbh
DNA-cytosine methyltransferase {ECO:0000313|EMBL:ESZ66071.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
SCNpilot_cont_500_bf_scaffold_1960_16
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15457..18099
DNA (2643bp) protein (881aa)
Alpha-1,4 polygalactosaminidase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HRY1_9RHIZ rbh
Alpha-1,4 polygalactosaminidase {ECO:0000313|EMBL:ESZ66072.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
endonuclease, Z1 domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1960_17
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18170..18811
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HSE6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ66073.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
Displaying 17 items

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