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SCNpilot_cont_500_bf_scaffold_10255

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_10255_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..403)
DNA (402bp) protein (134aa)
TRAG protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH7_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53307.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
TRAG protein; K03205 type IV secretion system protein VirD4
SCNpilot_cont_500_bf_scaffold_10255_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(381..1439)
DNA (1059bp) protein (353aa)
Type II secretion system protein E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH6_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53308.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
SCNpilot_cont_500_bf_scaffold_10255_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1402..1914)
DNA (513bp) protein (171aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK51_OLICO
virB10; type IV secretion protein VirB10; K03195 type IV secretion system protein VirB10
Type IV secretion protein VirB10 {ECO:0000313|EMBL:AEI08309.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_10255_4
unknown

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2004..2729
DNA (726bp) protein (242aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_10255_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2684..3487)
DNA (804bp) protein (268aa)
P-type conjugative transfer protein VirB9 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK50_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53118.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
virB9; type IV secretion protein VirB9; K03204 type IV secretion system protein VirB9 rbh
SCNpilot_cont_500_bf_scaffold_10255_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3484..4200)
DNA (717bp) protein (239aa)
Type IV secretion protein VirB8 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK49_OLICO
virulence protein; K03203 type IV secretion system protein VirB8
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53117.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_10255_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4197..5327)
DNA (1131bp) protein (377aa)
TrbL/VirB6 plasmid conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK48_OLICO
virB6; type IV secretion protein VirB6; K03201 type IV secretion system protein VirB6
Type IV secretion protein VirB6 {ECO:0000313|EMBL:AEI08312.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_10255_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5336..5530)
DNA (195bp) protein (65aa)
Putative lipoprotein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK47_OLICO
lipoprotein
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53115.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_10255_9
unknown

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comp(5527..5721)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK46_OLICO
hypothetical protein
SCNpilot_cont_500_bf_scaffold_10255_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5742..6200)
DNA (459bp) protein (153aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK45_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08313.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_10255_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6351..7253)
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK44_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08314.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_10255_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7250..7675)
DNA (426bp) protein (142aa)
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO
virB4; type IV secretion protein VirB4; K03199 type IV secretion system protein VirB4
Type IV secretion protein VirB4 {ECO:0000313|EMBL:AEI08315.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Displaying 12 items

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