ggKbase home page

SCNpilot_cont_500_bf_scaffold_10887

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_10887_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..137
DNA (135bp) protein (45aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
GTP cyclohydrolase I n=1 Tax=Dyella japonica RepID=UPI0002D89025
GTP cyclohydrolase I
SCNpilot_cont_500_bf_scaffold_10887_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140..466
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH95_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98836.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_10887_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(463..684)
DNA (222bp) protein (74aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ64_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL89355.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_10887_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1336..1860
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B3FB0
Major type 1 subunit fimbrin (Pilin) {ECO:0000313|EMBL:EIL87893.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K07345 major type 1 subunit fimbrin (pilin)
SCNpilot_cont_500_bf_scaffold_10887_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1956..2213
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003480561
Uncharacterized protein {ECO:0000313|EMBL:KGI78932.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_10887_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2216..2614
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003480561
Molecular chaperone EcpD {ECO:0000313|EMBL:AHX15581.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Pili assembly chaperone, N-terminal
SCNpilot_cont_500_bf_scaffold_10887_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2638..5220
DNA (2583bp) protein (861aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346FBA8 rbh
P pilus assembly protein, porin PapC {ECO:0000313|EMBL:EIL87638.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
P pilus assembly protein, porin PapC
SCNpilot_cont_500_bf_scaffold_10887_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5217..6161
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B8F4A
P pilus assembly protein, pilin FimA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_10887_9
unknown

Not on your lists

comp(6183..6557)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_10887_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6781..7527)
DNA (747bp) protein (249aa)
Phenol hydroxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Z0_9GAMM rbh
Phenol hydroxylase {ECO:0000313|EMBL:EIL93831.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
flavodoxin reductase family protein rbh
Displaying 10 items

View Taxonomy