ggKbase home page

SCNpilot_cont_500_bf_scaffold_25170

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_25170_1
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..511
DNA (510bp) protein (170aa)
HTH domain family n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT63_9RHOB
HTH domain family {ECO:0000313|EMBL:EEE46059.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_25170_2
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(731..1453)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D7BB5 rbh
hypothetical protein; K09987 hypothetical protein
Protein containing DUF1013 {ECO:0000313|EMBL:AEV39222.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
SCNpilot_cont_500_bf_scaffold_25170_3
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1654..2295)
DNA (642bp) protein (214aa)
UPI0003CFB45A related cluster n=1 Tax=unknown RepID=UPI0003CFB45A
NAD(P)H quinone oxidoreductase
NAD(P)H quinone oxidoreductase {ECO:0000313|EMBL:ESZ26686.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_cont_500_bf_scaffold_25170_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2665..2859
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHM1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64276.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_25170_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3184..3714
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003625E39
hypothetical protein; K13592 regulator of CtrA degradation
Hypothetical conserved protein {ECO:0000313|EMBL:ADZ69322.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_25170_6
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3794..4015)
DNA (222bp) protein (74aa)
50S ribosomal protein L31 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000365D05E
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_cont_500_bf_scaffold_25170_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4134..5165)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364C78B rbh
OmpA family protein; K02557 chemotaxis protein MotB
OmpA family protein {ECO:0000313|EMBL:ADZ69327.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_25170_8
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5171..5704)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036BFD47
Flagellar motor protein MotA {ECO:0000313|EMBL:ERP85983.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
MotA/TolQ/ExbB proton channel family protein
Displaying 8 items

View Taxonomy