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SCNpilot_cont_500_bf_scaffold_8362

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8362_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..478
DNA (477bp) protein (159aa)
putative methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94046.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_8362_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(581..1336)
DNA (756bp) protein (252aa)
short chain dehydrogenase (EC:1.1.1.-) rbh
Short chain dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VML4_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_8362_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1401..2135)
DNA (735bp) protein (245aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K6_9GAMM rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL94047.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_8362_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2137..2736)
DNA (600bp) protein (200aa)
2-dehydropantoate 2-reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K7_9GAMM
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EIL94048.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative dinucleotide-binding enzyme
SCNpilot_cont_500_bf_scaffold_8362_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2864..3754
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WYS5_9GAMM rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AGG89839.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_8362_6
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3857..4435)
DNA (579bp) protein (193aa)
integrin-like protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E305
Na-Ca exchanger/integrin-beta4 {ECO:0000313|EMBL:EED30498.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8362_7
unknown

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4495..5331
DNA (837bp) protein (279aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8362_8
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5264..5548)
DNA (285bp) protein (95aa)
RelE protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZX7_9GAMM
RelE/StbE family addiction module toxin
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_8362_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5538..5783)
DNA (246bp) protein (82aa)
Prevent-host-death family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZX8_9GAMM
Prevent-host-death family protein {ECO:0000313|EMBL:EIL92769.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RelB
SCNpilot_cont_500_bf_scaffold_8362_10
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5949..7943)
DNA (1995bp) protein (665aa)
Outer membrane receptor protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PZM3_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49450.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
TonB-dependent receptor rbh
SCNpilot_cont_500_bf_scaffold_8362_11
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8052..8393
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HGS5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFN49449.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8362_12
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8393..9055
DNA (663bp) protein (221aa)
transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI0003800FBA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49448.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
phoP; two-component response regulator rbh
SCNpilot_cont_500_bf_scaffold_8362_13
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9052..10398
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
phoQ; two-component sensor histidine kinase (EC:2.7.13.3) rbh
Two-component sensor histidine kinase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4J1_CAUCN rbh
SCNpilot_cont_500_bf_scaffold_8362_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10617..11120)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU46_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02988.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
Displaying 14 items

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