ggKbase home page

SCNpilot_cont_500_bf_scaffold_8993

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8993_1

Not on your lists

2..856
DNA (855bp) protein (285aa)
Permease protein n=1 Tax=Aplysina aerophoba bacterial symbiont clone pAPKS18 RepID=A4U8R8_9BACT
Permease protein {ECO:0000313|EMBL:ABE03920.1}; TaxID=377637 species="Bacteria; environmental samples.;" source="Aplysina aerophoba bacterial symbiont clone pAPKS18.;"
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein
SCNpilot_cont_500_bf_scaffold_8993_2
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

921..1985
DNA (1065bp) protein (355aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CZU1_RHILU rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EKJ94900.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_8993_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

2006..2776
DNA (771bp) protein (257aa)
Putative dehydrogenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXR0_THERP
putative dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:ACM04859.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_cont_500_bf_scaffold_8993_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2810..4309
DNA (1500bp) protein (500aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
Amidohydrolase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LJ35_9RHIZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_8993_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4332..5159
DNA (828bp) protein (276aa)
Transcriptional regulator, RpiR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEA9_METNO
Uncharacterized protein {ECO:0000313|EMBL:EWY35995.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
RpiR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_8993_6
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5156..6475
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Halomonas smyrnensis RepID=UPI000309CD85
Uncharacterized protein {ECO:0000313|EMBL:KGE76975.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
hypothetical protein
Displaying 6 items

View Taxonomy