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SCNpilot_cont_500_bf_scaffold_3021

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3021_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..2057
DNA (2055bp) protein (685aa)
glycine dehydrogenase, decarboxylating (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glycine dehydrogenase (decarboxylating) n=1 Tax=Rhodanobacter denitrificans RepID=I4WY26_9GAMM
SCNpilot_cont_500_bf_scaffold_3021_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2073..2924)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXL4_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_3021_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3470..4621
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDS3_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88920.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3021_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4741..5442
DNA (702bp) protein (234aa)
Pirin-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMJ7_9GAMM
Pirin-related protein
Pirin-related protein {ECO:0000313|EMBL:AGG88921.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3021_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5586..6662
DNA (1077bp) protein (359aa)
O6-methylguanine-DNA methyltransferase/Ada regulatory protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIB4_9GAMM rbh
O6-methylguanine-DNA methyltransferase/Ada regulatory protein {ECO:0000313|EMBL:EIL99205.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
O-6-methylguanine DNA methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_3021_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6659..7390
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIB3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99204.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3021_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7387..8040
DNA (654bp) protein (218aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Y0_9GAMM
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:EIL95221.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alkylated DNA repair protein
SCNpilot_cont_500_bf_scaffold_3021_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8018..8446)
DNA (429bp) protein (143aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMK3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_3021_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8456..8797)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88927.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3021_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8949..9872
DNA (924bp) protein (308aa)
Beta-lactamase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXK5_9GAMM rbh
Zn-dependent hydrolase, glyoxylase rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGG88928.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3021_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9891..10763)
DNA (873bp) protein (291aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDX0_9GAMM rbh
Zn-dependent hydrolase, glyoxylase rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGG88929.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3021_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10856..11203)
DNA (348bp) protein (116aa)
EMAP domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDT4_9GAMM
EMAP domain-containing protein
EMAP domain-containing protein {ECO:0000313|EMBL:AGG88930.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3021_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11200..12489)
DNA (1290bp) protein (430aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhodanobacter denitrificans RepID=M4NMK9_9GAMM rbh
glycine/D-amino acid oxidase, deaminating rbh
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:AGG88931.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3021_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12568..13443)
DNA (876bp) protein (292aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9) rbh
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
UDP-glucose pyrophosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXK1_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_3021_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13440..15338)
DNA (1899bp) protein (633aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA4_9GAMM
putative nucleoside-diphosphate sugar epimerase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_3021_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15325..15981)
DNA (657bp) protein (219aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDX6_9GAMM
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_3021_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16267..16437)
DNA (171bp) protein (57aa)
Tetratricopeptide repeat protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXJ8_9GAMM
putative N-acetylglucosaminyl transferase
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 17 items

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