ggKbase home page

SCNpilot_cont_500_bf_scaffold_3217

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3217_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..477
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH65_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98806.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
conserved hypothetical phage tail region protein rbh
SCNpilot_cont_500_bf_scaffold_3217_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

483..1220
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCW2_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87657.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3217_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1217..1972
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WFH1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87658.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3217_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1969..3213
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NAV0_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87659.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3217_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3210..5375
DNA (2166bp) protein (722aa)
ATPase AAA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEB2_9GAMM rbh
ATPase AAA {ECO:0000313|EMBL:EIL97803.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
AAA+ family ATPase rbh
SCNpilot_cont_500_bf_scaffold_3217_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5372..5704
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEB1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL97802.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_3217_7
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5745..6575
DNA (831bp) protein (277aa)
peptidase C1A papain id=14623060 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria rbh
peptidase C1A papain rbh
Tax=CSP1_8_Deltaproteobacteria
SCNpilot_cont_500_bf_scaffold_3217_8
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6575..8059
DNA (1485bp) protein (495aa)
Putative uncharacterized protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J3E7_PSEUL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK76592.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
SCNpilot_cont_500_bf_scaffold_3217_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8056..8712
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMJ6_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87668.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3217_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8778..9386
DNA (609bp) protein (203aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=2 Tax=Alicycliphilus denitrificans RepID=E8TZJ6_ALIDB
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:ADU98543.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_500_bf_scaffold_3217_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9420..9740
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEA2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97793.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3217_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9733..10869
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAS1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87670.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3217_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10866..11021
DNA (156bp) protein (52aa)
Phage-related baseplate assembly protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMJ3_9GAMM
Phage-related baseplate assembly protein {ECO:0000313|EMBL:EIL97791.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
Displaying 13 items

View Taxonomy