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SCNpilot_cont_500_bf_scaffold_3250

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3250_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..506)
DNA (504bp) protein (168aa)
COGs COG0726 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK79_9PROT
Polysaccharide deacetylase {ECO:0000313|EMBL:KIO49477.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
polysaccharide deacetylase
SCNpilot_cont_500_bf_scaffold_3250_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(672..2015)
DNA (1344bp) protein (448aa)
O-antigen polymerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB3_NITMU
Polymerase {ECO:0000313|EMBL:KIO49418.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
O-antigen polymerase
SCNpilot_cont_500_bf_scaffold_3250_3
unknown

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comp(2067..2183)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3250_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2199..3482)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0X0_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER61928.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3250_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

3676..4620
DNA (945bp) protein (315aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
SCNpilot_cont_500_bf_scaffold_3250_6
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

4636..5763
DNA (1128bp) protein (376aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC81784.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
SCNpilot_cont_500_bf_scaffold_3250_7
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5898..6509
DNA (612bp) protein (204aa)
hypothetical protein id=2302450 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB2_Desulfobacterales_56_26_curated
SCNpilot_cont_500_bf_scaffold_3250_8
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6565..7998
DNA (1434bp) protein (478aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AHL3_NITEC rbh
polysaccharide biosynthesis protein rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ABI59169.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
SCNpilot_cont_500_bf_scaffold_3250_9
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

8067..8783
DNA (717bp) protein (239aa)
type 11 methyltransferase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4AC1D
methyltransferase type 12
Tax=RBG_13_WOR_2_41_10_curated
SCNpilot_cont_500_bf_scaffold_3250_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8842..10212)
DNA (1371bp) protein (457aa)
capsular polysaccharide biosynthesis protein CapK; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] rbh
Coenzyme F390 synthetase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLK7_9PROT
Capsule biosynthesis protein CapK {ECO:0000313|EMBL:KIO49422.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_3250_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10209..10922)
DNA (714bp) protein (238aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DXB2_9PROT rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:KIO49423.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
group 1 glycosyl transferase rbh
Displaying 11 items

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