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SCNpilot_cont_500_bf_scaffold_3280

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3280_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..3869)
DNA (3867bp) protein (1289aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_3280_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4042..8484)
DNA (4443bp) protein (1481aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_3280_3
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8682..10031
DNA (1350bp) protein (450aa)
Monooxygenase FAD-binding protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MHU2_9BURK rbh
monooxygenase FAD-binding protein rbh
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AET93159.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_cont_500_bf_scaffold_3280_4
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10212..11081)
DNA (870bp) protein (290aa)
enoyl-CoA hydratase/isomerase; K13779 isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57] rbh
Enoyl-CoA hydratase/isomerase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WQJ0_VEREI rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABM59897.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_500_bf_scaffold_3280_5
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11165..12016
DNA (852bp) protein (284aa)
Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WQI8_VEREI rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM59895.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_500_bf_scaffold_3280_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12136..13752
DNA (1617bp) protein (539aa)
carboxyl transferase domain-containing protein 2 (EC:6.4.1.-); K13778 geranyl-CoA carboxylase beta subunit [EC:6.4.1.5] rbh
Carboxyl transferase domain protein 2 {ECO:0000313|EMBL:ADP19208.1}; EC=6.4.1.- {ECO:0000313|EMBL:ADP19208.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
Carboxyl transferase domain protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJH6_ACHXA rbh
SCNpilot_cont_500_bf_scaffold_3280_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13776..14939
DNA (1164bp) protein (388aa)
Isovaleryl-CoA dehydrogenase (EC:1.3.99.10); K11731 citronellyl-CoA dehydrogenase [EC:1.3.99.-] rbh
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB82456.1}; EC=1.3.99.10 {ECO:0000313|EMBL:AEB82456.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR87_ALIDB rbh
SCNpilot_cont_500_bf_scaffold_3280_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14956..16905
DNA (1950bp) protein (650aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR86_ALIDB rbh
carbamoyl-phosphate synthase l chain ATP-binding protein rbh
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADU97797.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_500_bf_scaffold_3280_9
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16902..18734
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WQI6_VEREI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM59893.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_500_bf_scaffold_3280_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18800..19777
DNA (978bp) protein (326aa)
Extra-cytoplasmic solute receptor n=2 Tax=Alicycliphilus denitrificans RepID=E8TR84_ALIDB rbh
ABC transporter substrate-binding protein rbh
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:GAO25728.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_cont_500_bf_scaffold_3280_11
unknown

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comp(19887..20066)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3280_12
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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20751..23678
DNA (2928bp) protein (976aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000374333E
outer membrane autotransporter
Tax=BJP_S1_SUB10_Methylophilales_55_32
Displaying 12 items

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