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SCNpilot_cont_500_bf_scaffold_3737

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3737_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..374
DNA (372bp) protein (124aa)
Cytochrome-c oxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTF1_9GAMM
Cytochrome-c oxidase {ECO:0000313|EMBL:EIL90492.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cbb3-type cytochrome oxidase subunit 1
SCNpilot_cont_500_bf_scaffold_3737_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

371..1300
DNA (930bp) protein (310aa)
Cbb3-type cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTF0_9GAMM
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIL90491.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cbb3-type cytochrome oxidase, cytochrome c subunit
SCNpilot_cont_500_bf_scaffold_3737_3
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1297..1449
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVC2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG63728.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_cont_500_bf_scaffold_3737_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1464..1916
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTE9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90490.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3737_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2332..2673
DNA (342bp) protein (114aa)
Alkylhydroperoxidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPG9_9GAMM
alkylhydroperoxidase AhpD family core domain protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_3737_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2721..3530
DNA (810bp) protein (270aa)
cysteine synthase (EC:2.5.1.47)
Pyridoxal-5'-phosphate-dependent enzyme subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWA8_9GAMM
Pyridoxal-5'-phosphate-dependent enzyme subunit beta {ECO:0000313|EMBL:EIL91499.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_3737_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3591..5282)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3W9R2_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_500_bf_scaffold_3737_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5478..6143)
DNA (666bp) protein (222aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WVA2_9GAMM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_3737_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6344..8092
DNA (1749bp) protein (583aa)
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW5_9GAMM rbh
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane {ECO:0000313|EMBL:EIL99406.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3HB-oligomer hydrolase (3HBOH) rbh
SCNpilot_cont_500_bf_scaffold_3737_10
unknown

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8287..8469
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3737_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8623..10266
DNA (1644bp) protein (548aa)
Alpha,alpha-trehalase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH34_9GAMM
Alpha,alpha-trehalase {ECO:0000313|EMBL:EIL98775.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
neutral trehalase
SCNpilot_cont_500_bf_scaffold_3737_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10341..10850
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW4_9GAMM rbh
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_3737_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10985..11404
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91448.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3737_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11450..11704)
DNA (255bp) protein (85aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WV98_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88682.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3737_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12217..12993
DNA (777bp) protein (259aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGA7_9GAMM
aspartate/tyrosine/aromatic aminotransferase
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:AGG88683.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3737_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13083..14066
DNA (984bp) protein (328aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Malate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW1_9GAMM rbh
malate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_3737_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14185..15309)
DNA (1125bp) protein (375aa)
Na(+)/H(+) antiporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHZ3_9GAMM rbh
Na(+)/H(+) antiporter {ECO:0000313|EMBL:EIL99084.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Kef-type K+ transport system, membrane component rbh
Displaying 17 items

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