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SCNpilot_cont_500_bf_scaffold_3893

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3893_1
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1034..2116)
DNA (1083bp) protein (361aa)
Type IV secretory pathway, VirB6 component n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C2F9_9XANT rbh
Type IV secretory pathway, VirB6 component {ECO:0000313|EMBL:EGD20299.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
TrbL/VirB6 plasmid conjugal transfer protein; K03201 type IV secretion system protein VirB6 rbh
SCNpilot_cont_500_bf_scaffold_3893_2
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2127..2375)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4R9_9XANT
plasmid-related lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:CCC18689.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. CFBP 5530.;"
SCNpilot_cont_500_bf_scaffold_3893_3
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2372..2800)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T168_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CEI19087.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
membrane protein
SCNpilot_cont_500_bf_scaffold_3893_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2810..3523)
DNA (714bp) protein (238aa)
Putative conjugal transfer protein VirB5 n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M423_9XANT
P-type DNA transfer protein VirB5 {ECO:0000313|EMBL:CDN21665.1}; TaxID=487899 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. viticola.;"
plasmid-related exported protein
SCNpilot_cont_500_bf_scaffold_3893_5
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3877..5478)
DNA (1602bp) protein (534aa)
TraD protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S2_9XANT
TrwB {ECO:0000313|EMBL:KCW99748.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni.;"
trwB; Type IV secretion system protein rbh
SCNpilot_cont_500_bf_scaffold_3893_6
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5475..5906)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S3_9XANT
Uncharacterized protein {ECO:0000313|EMBL:CEI18811.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
SCNpilot_cont_500_bf_scaffold_3893_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5916..6611)
DNA (696bp) protein (232aa)
StbB n=1 Tax=Thauera sp. 28 RepID=N6ZFP2_9RHOO rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_cont_500_bf_scaffold_3893_8
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6608..7033)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S5_9XANT
Uncharacterized protein {ECO:0000313|EMBL:GAE52555.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3893_9
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7458..7820
DNA (363bp) protein (121aa)
Putative relaxase protein MobC n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S6_9XANT
Putative relaxase protein MobC {ECO:0000313|EMBL:CCC18696.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. CFBP 5530.;"
mobilization protein
SCNpilot_cont_500_bf_scaffold_3893_10
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7810..10188
DNA (2379bp) protein (793aa)
Probable relaxase n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M411_9XANT
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81912.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
relaxase rbh
Displaying 10 items

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