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SCNpilot_cont_500_bf_scaffold_6041

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6041_1
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..735)
DNA (735bp) protein (245aa)
integrase n=1 Tax=Sphingomonas wittichii RepID=UPI0002D5B81A
Integrase {ECO:0000313|EMBL:KFG89883.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
integrase domain-containing protein
SCNpilot_cont_500_bf_scaffold_6041_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(845..1603)
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V110_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS30412.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ardC antirestriction protein
SCNpilot_cont_500_bf_scaffold_6041_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1749..3095)
DNA (1347bp) protein (449aa)
regulatory protein; K00383 glutathione reductase (NADPH) [EC:1.8.1.7] rbh
Putative regulatory protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAA2_PHEZH rbh
Putative regulatory protein {ECO:0000313|EMBL:ACG77909.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_500_bf_scaffold_6041_4
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3077..3862)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037E6762 rbh
Mercuric reductase {ECO:0000313|EMBL:KFG89876.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
mercuric reductase
SCNpilot_cont_500_bf_scaffold_6041_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3894..5582)
DNA (1689bp) protein (563aa)
merA; Mercuric ion reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223, ECO:0000313|EMBL:CCH12111.1};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16404 rbh
SCNpilot_cont_500_bf_scaffold_6041_6
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5596..5874)
DNA (279bp) protein (93aa)
mercury transporter n=1 Tax=Afipia birgiae RepID=UPI0002E015E1
merP; Mercuric transport protein periplasmic protein; K08364 periplasmic mercuric ion binding protein
Mercuric transport protein periplasmic component {ECO:0000313|EMBL:AIO47395.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
SCNpilot_cont_500_bf_scaffold_6041_7
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5887..6237)
DNA (351bp) protein (117aa)
Mercuric transport protein, MerT n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G9P4_BURVI
Mercuric transport protein, MerT {ECO:0000313|EMBL:ERJ39810.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
putative mercuric transport protein; K08363 mercuric ion transport protein
SCNpilot_cont_500_bf_scaffold_6041_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6272..6697)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000364C9FA
Putative mercury transport protein MerC {ECO:0000313|EMBL:EIM01202.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MerC mercury resistance protein
SCNpilot_cont_500_bf_scaffold_6041_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6841..7266
DNA (426bp) protein (142aa)
Transcriptional regulator, MerR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA99_PHEZH
transcriptional regulator, MerR family; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACG77906.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_500_bf_scaffold_6041_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7447..8619
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V111_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53391.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6041_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8703..10082
DNA (1380bp) protein (460aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V112_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI53392.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
Displaying 11 items

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