ggKbase home page

SCNpilot_cont_500_bf_scaffold_6192

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6192_1
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

422..850
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6K4M9_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST23904.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
major facilitator transporter; K08369 MFS transporter, putative metabolite:H+ symporter
SCNpilot_cont_500_bf_scaffold_6192_2
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

852..1286
DNA (435bp) protein (145aa)
Tryptophan halogenase, putative n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FQ65_PELBH
Tryptophan halogenase, putative {ECO:0000313|EMBL:EAU46382.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
tryptophan halogenase
SCNpilot_cont_500_bf_scaffold_6192_3
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1439..2497
DNA (1059bp) protein (353aa)
Putative tryptophan halogenase n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DTD4_PHAIB
tryptophan halogenase
Putative tryptophan halogenase {ECO:0000313|EMBL:AFO92326.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 /; NBRC 16654 / BS107).;"
SCNpilot_cont_500_bf_scaffold_6192_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2522..2905
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRM3_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22252.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_500_bf_scaffold_6192_5
unknown

Not on your lists

2898..3077
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6192_6
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3078..5267)
DNA (2190bp) protein (730aa)
lead, cadmium, zinc and mercury-transporting ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Copper/silver-translocating P-type ATPase n=1 Tax=Rhizobium sp. CF122 RepID=J2IJ61_9RHIZ
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:EJL48753.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
SCNpilot_cont_500_bf_scaffold_6192_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5355..6050)
DNA (696bp) protein (232aa)
transporter n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00037EA2BF
ZIP family zinc transporter {ECO:0000313|EMBL:ERF82217.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
transporter; K07238 zinc transporter, ZIP family
SCNpilot_cont_500_bf_scaffold_6192_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6306..6413
DNA (108bp) protein (36aa)
Transcriptional regulator, MerR family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYU9_HYPDA
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADJ23551.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Displaying 8 items

View Taxonomy