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SCNpilot_cont_500_bf_scaffold_6397

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6397_1
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..512)
DNA (510bp) protein (170aa)
MarR family transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI0003678E7A
Transcriptional regulator of MarR family {ECO:0000313|EMBL:EFO29495.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_6397_2
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(673..1095)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375EEF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ70337.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_6397_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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1193..2233
DNA (1041bp) protein (347aa)
hemB; Delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24] rbh
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWK9_POLGS rbh
SCNpilot_cont_500_bf_scaffold_6397_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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2230..3474
DNA (1245bp) protein (415aa)
Threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000378D260
Threonine dehydratase {ECO:0000313|EMBL:ADZ70334.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_6397_5
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3663..4166
DNA (504bp) protein (168aa)
RDD domain-containing protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPU3_9RHOB
RDD domain-containing protein {ECO:0000313|EMBL:EFO29486.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
RDD family protein
SCNpilot_cont_500_bf_scaffold_6397_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4234..4965
DNA (732bp) protein (244aa)
arginyl-tRNA-protein transferase; K00685 arginine-tRNA-protein transferase [EC:2.3.2.8]
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003721059
SCNpilot_cont_500_bf_scaffold_6397_7
unknown

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comp(5330..5722)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6397_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5724..6230)
DNA (507bp) protein (169aa)
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
DNA topoisomerase IV subunit A n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036A3A4D
Displaying 8 items

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