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SCNpilot_cont_500_bf_scaffold_44187

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_44187_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..856
DNA (855bp) protein (285aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hutU; urocanate hydratase HutU (EC:4.2.1.49)
urocanate hydratase n=1 Tax=Rhizobium giardinii RepID=UPI0003829B35
SCNpilot_cont_500_bf_scaffold_44187_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(981..1190)
DNA (210bp) protein (70aa)
Protein SlyX homolog n=2 Tax=Rhizobium leguminosarum RepID=J0V7D5_RHILV
Protein SlyX homolog {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
protein slyX; K03745 SlyX protein
SCNpilot_cont_500_bf_scaffold_44187_3
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1376..1654
DNA (279bp) protein (93aa)
HNS-type DNA binding protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3V0_AGRVS
HNS-type DNA binding protein
HNS-type DNA binding protein {ECO:0000313|EMBL:ACM39605.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_44187_4
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1728..1934)
DNA (207bp) protein (69aa)
UPF0061 protein ISM_15440 n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SP82_9RHOB
UPF0061 protein ISM_15440 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_44187_5
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1910..2470)
DNA (561bp) protein (187aa)
UPF0061 protein PDO_2507 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9S9_9RHIZ
UPF0061 protein PDO_2507 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_44187_6
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2524..2964
DNA (441bp) protein (147aa)
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_cont_500_bf_scaffold_44187_7
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2866..3123)
DNA (258bp) protein (86aa)
UPF0061 protein QWE_08426 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QG73_9RHIZ
UPF0061 protein QWE_08426 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_44187_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3229..3702)
DNA (474bp) protein (158aa)
Rrf2 family protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VFC5_9RHIZ
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KDP70541.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_44187_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4051..4266
DNA (216bp) protein (72aa)
sulfate transporter subunit n=1 Tax=Rhizobium leguminosarum RepID=UPI0003627535
sulfate-binding protein precursor; K02048 sulfate transport system substrate-binding protein
Sulfate-binding protein {ECO:0000313|EMBL:ACP22625.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
Displaying 9 items

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