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SCNpilot_cont_500_bf_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 746 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13_1
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

271..1962
DNA (1692bp) protein (564aa)
L-lactate transport n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7431F rbh
L-lactate transport rbh
L-lactate transport {ECO:0000313|EMBL:ADV82355.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_500_bf_scaffold_13_2
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2519..3433
DNA (915bp) protein (305aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) rbh
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ADV82354.1}; EC=1.1.1.60 {ECO:0000313|EMBL:ADV82354.1};; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
2-hydroxy-3-oxopropionate reductase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V1S3_TERSS rbh
SCNpilot_cont_500_bf_scaffold_13_3
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3724..4239)
DNA (516bp) protein (172aa)
TspO and MBR like protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLY0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHE97724.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
crtK_[H]; TspO and MBR like protein
SCNpilot_cont_500_bf_scaffold_13_4

Not on your lists

4383..4955
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037CA80B
R3H domain protein {ECO:0000313|EMBL:AIA11585.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative RNA-binding protein
SCNpilot_cont_500_bf_scaffold_13_5
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5264..6832)
DNA (1569bp) protein (523aa)
serine protease n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B44B9B rbh
subtilisin-like serine protease rbh
Subtilisin-like serine protease {ECO:0000313|EMBL:AFL88622.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_500_bf_scaffold_13_6
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7206..9515
DNA (2310bp) protein (770aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
V-type H(+)-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] rbh
pyrophosphatase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036B9FB5 rbh
SCNpilot_cont_500_bf_scaffold_13_7
unknown

Not on your lists

comp(9873..10403)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036B1D67
SCNpilot_cont_500_bf_scaffold_13_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10549..11457)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000373BFF1 rbh
alcohol dehydrogenase GroES domain protein rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADW70762.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_500_bf_scaffold_13_9
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12147..14180)
DNA (2034bp) protein (678aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
threonyl-tRNA synthetase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B50BB7 rbh
SCNpilot_cont_500_bf_scaffold_13_10
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14785..16281)
DNA (1497bp) protein (499aa)
glycosyl hydrolase family protein; K01193 beta-fructofuranosidase [EC:3.2.1.26] rbh
Glycosyl hydrolase family 32 domain protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXS7_TERSS rbh
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:ADV83093.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_500_bf_scaffold_13_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16455..16886)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH78_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90259.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_13_12
unknown

Not on your lists

comp(16974..17912)
DNA (939bp) protein (313aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_13_13
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17944..19104)
DNA (1161bp) protein (387aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] rbh
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
DNA polymerase III subunit beta n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036E4C25 rbh
SCNpilot_cont_500_bf_scaffold_13_14
Exiguobacterium sp. MH3, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20026..20664
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B4B1B
Oxidoreductase {ECO:0000313|EMBL:AHA29268.1}; TaxID=1399115 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. MH3.;"
NmrA family protein
SCNpilot_cont_500_bf_scaffold_13_15
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(21050..22486)
DNA (1437bp) protein (479aa)
chromosome replication initiation protein DnaA n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E2041 rbh
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_500_bf_scaffold_13_16
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22936..23835)
DNA (900bp) protein (300aa)
oxidoreductase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000380589F rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ADV84050.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_500_bf_scaffold_13_17
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


24122..24277
DNA (156bp) protein (52aa)
50S ribosomal protein L34 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WWP4_ACISM
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_500_bf_scaffold_13_18
unknown

Not on your lists

24390..24548
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_13_19
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

24728..25126
DNA (399bp) protein (133aa)
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5A
Ribonuclease P protein component n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WWP3_ACISM
SCNpilot_cont_500_bf_scaffold_13_20
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(25769..26086)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000380EBBE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL86361.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_500_bf_scaffold_13_21
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26106..26888
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003742A26 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADW70755.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_500_bf_scaffold_13_22
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(27208..27405)
DNA (198bp) protein (66aa)
Putative uncharacterized protein id=4223236 bin=GWF2_OP3_43_52 species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
SCNpilot_cont_500_bf_scaffold_13_23
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27522..28010)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003617EF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW67125.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_500_bf_scaffold_13_24
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28257..29522)
DNA (1266bp) protein (422aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
serine hydroxymethyltransferase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000379C416 rbh
SCNpilot_cont_500_bf_scaffold_13_25
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30078..32393
DNA (2316bp) protein (772aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000365B2B6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ64644.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
alpha-1,2-mannosidase rbh
SCNpilot_cont_500_bf_scaffold_13_26
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

32464..33897
DNA (1434bp) protein (478aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] rbh
FolC bifunctional protein {ECO:0000313|EMBL:AEU34414.1}; EC=6.3.2.17 {ECO:0000313|EMBL:AEU34414.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036C3F11 rbh
SCNpilot_cont_500_bf_scaffold_13_27
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

33894..34784
DNA (891bp) protein (297aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] rbh
acyltransferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B587DA rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ADW70777.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_500_bf_scaffold_13_28
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

35143..35472
DNA (330bp) protein (110aa)
chromophore lyase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4E400
zinc finger CHY domain-containing protein
Zinc finger CHY domain protein {ECO:0000313|EMBL:AEU36041.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_500_bf_scaffold_13_29

Not on your lists

comp(35611..37272)
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000381AD8F rbh
Putative secreted protein, xanthan lyase related {ECO:0000313|EMBL:CBI08031.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_13_30
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(37453..38409)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B2E9B5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFL86460.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
Displaying items 1-30 of 746 in total

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