ggKbase home page

SCNpilot_cont_500_bf_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_78_1
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..956
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036738CC rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS11003.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
endonuclease/exonuclease/phosphatase
SCNpilot_cont_500_bf_scaffold_78_2
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1614..8429
DNA (6816bp) protein (2272aa)
hypothetical protein, partial n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000365B413 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACL41861.1}; Flags: Precursor;; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_78_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8452..9612)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B140D rbh
hypothetical protein
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:AGA26766.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_500_bf_scaffold_78_4
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(9609..10598)
DNA (990bp) protein (330aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037DCCE6 rbh
NAD-dependent epimerase {ECO:0000313|EMBL:KIY10845.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_cont_500_bf_scaffold_78_5
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(10686..11378)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003613678 rbh
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:AFY86348.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
SCNpilot_cont_500_bf_scaffold_78_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11368..12474)
DNA (1107bp) protein (369aa)
Glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003654F16 rbh
Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:CDM66070.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
SCNpilot_cont_500_bf_scaffold_78_7
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12471..13034)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036FB75D
transferase
Tax=GWC2_Geobacteraceae_58_44_curated
SCNpilot_cont_500_bf_scaffold_78_8
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13035..14078)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D30A6 rbh
oxidoreductase domain protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:AFZ56956.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
SCNpilot_cont_500_bf_scaffold_78_9
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(14451..15509)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B7C46 rbh
Fis family sigma-54 specific transcriptional regulator
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
SCNpilot_cont_500_bf_scaffold_78_10
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16099..16743
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003681437
periplasmic protein involved in polysaccharide export
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:AFL87563.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_500_bf_scaffold_78_11
unknown

Not on your lists

16753..18072
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D9D84 rbh
SCNpilot_cont_500_bf_scaffold_78_12
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18096..19631
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035FD61C rbh
exopolysaccharide biosynthesis protein rbh
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:AFL87561.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_500_bf_scaffold_78_13
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19583..20392
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000361CB17
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:AEU37840.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_500_bf_scaffold_78_14
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

20470..21693
DNA (1224bp) protein (408aa)
Putative Multicopper oxidase {ECO:0000313|EMBL:CCF84259.1}; EC=1.-.-.- {ECO:0000313|EMBL:CCF84259.1};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037C3357 rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_78_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

22178..22789
DNA (612bp) protein (204aa)
transcription termination factor NusG domain protein id=14429879 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10
transcription antitermination protein nusG
Tax=CSP1_5_NC10
SCNpilot_cont_500_bf_scaffold_78_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

22899..24050
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037213E3 rbh
undecaprenyl-phosphate galactose phosphotransferase rbh
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
SCNpilot_cont_500_bf_scaffold_78_17
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24084..25670
DNA (1587bp) protein (529aa)
membrane protein n=1 Tax=Methylosarcina fibrata RepID=UPI00035F4150 rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EGW20761.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_78_18
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

25744..26727
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000375F4DC rbh
glycosyl transferase family protein; K07011
Tax=GWF2_Lentisphaerae_52_8_curated
SCNpilot_cont_500_bf_scaffold_78_19
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

26840..28231
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000377B890 rbh
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
SCNpilot_cont_500_bf_scaffold_78_20
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28305..29486
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003822866 rbh
group 1 glycosyl transferase rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABK16665.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
SCNpilot_cont_500_bf_scaffold_78_21
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29476..30357
DNA (882bp) protein (294aa)
Glycosyl transferase family 2 n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J0M4_9GAMM rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EGW20746.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
family 2 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_78_22
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30442..31218
DNA (777bp) protein (259aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS05961.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
SCNpilot_cont_500_bf_scaffold_78_23

Not on your lists

31247..32290
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003747E9F rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD36719.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_78_24
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32320..33651
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000370CC2A rbh
hypothetical protein
Tax=CG_Syntroph_02
SCNpilot_cont_500_bf_scaffold_78_25

Not on your lists

33655..35649
DNA (1995bp) protein (665aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003634162
Marine sediment metagenome DNA, contig: S06H3_L01927 {ECO:0000313|EMBL:GAI11065.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_78_26
unknown

Not on your lists

comp(35599..35709)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_78_27
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

35965..37299
DNA (1335bp) protein (445aa)
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMG5_IGNAJ
Peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AFH50172.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
SCNpilot_cont_500_bf_scaffold_78_28
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37482..39296
DNA (1815bp) protein (605aa)
FkbH like protein n=1 Tax=Vibrio campbellii CAIM 519 = NBRC 15631 RepID=L8XK95_9VIBR rbh
FkbH like protein {ECO:0000313|EMBL:ELU53835.1}; TaxID=1224742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii CAIM 519 = NBRC 15631.;"
FkbH domain-containing protein
SCNpilot_cont_500_bf_scaffold_78_29
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39293..40060
DNA (768bp) protein (256aa)
Polysaccharide deacetylase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZGT4_9CAUL
polysaccharide deacetylase
Tax=RBG_16_Deltaproteobacteria_64_85_curated
SCNpilot_cont_500_bf_scaffold_78_30
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40099..41142
DNA (1044bp) protein (348aa)
gtuS2-9; Glycosyltransferase, family 2 (EC:2.4.1.-) rbh
Glycosyl transferase family 2 n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J0N2_9GAMM rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EGW20754.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
Displaying items 1-30 of 182 in total

View Taxonomy