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SCNpilot_cont_500_bf_scaffold_4850

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4850_1
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69..725
DNA (657bp) protein (219aa)
resolvase n=1 Tax=Sphingomonas melonis RepID=UPI0003804E5E
Uncharacterized protein {ECO:0000313|EMBL:EZP56488.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
parA; resolvase protein
SCNpilot_cont_500_bf_scaffold_4850_2
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(837..1598)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003747A2A rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB17963.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4850_3
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1622..2332)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003747A2A
Uncharacterized protein {ECO:0000313|EMBL:EJL28581.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4850_4
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2475..3044
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035C7C76 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI64677.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
SCNpilot_cont_500_bf_scaffold_4850_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3111..3533)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003762B6B
Sphingomonas taxi strain 30a NODE_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26335.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4850_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3642..5069)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036096F6
RND transporter {ECO:0000313|EMBL:KFD28054.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
oprN; outer membrane protein OprN
SCNpilot_cont_500_bf_scaffold_4850_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5069..6595)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036DA7F1 rbh
DSBA oxidoreductase {ECO:0000313|EMBL:KFD28053.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
SCNpilot_cont_500_bf_scaffold_4850_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6595..7833)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003676F83 rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:KFD28052.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A
SCNpilot_cont_500_bf_scaffold_4850_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8170..8976)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8G5_PHEZH rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_500_bf_scaffold_4850_10
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9000..9395)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Erythrobacter RepID=Q2N5G5_ERYLH
Thioesterase {ECO:0000313|EMBL:KEO86764.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4850_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9397..10206)
DNA (810bp) protein (270aa)
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase/isomerase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T9N1_CAUSK
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_500_bf_scaffold_4850_12
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10333..11097
DNA (765bp) protein (255aa)
Regulatory protein GntR, HTH n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDG3_9SPHN
Regulatory protein GntR {ECO:0000313|EMBL:AJA11732.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
regulatory protein GntR
SCNpilot_cont_500_bf_scaffold_4850_13
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11144..12280
DNA (1137bp) protein (379aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EL96_9SPHN
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:AJA11731.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
oxidoreductase, 2-nitropropane dioxygenas rbh
SCNpilot_cont_500_bf_scaffold_4850_14
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12310..13482
DNA (1173bp) protein (391aa)
Putative nonspecific lipid-transfer protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDG0_9SPHN
Nonspecific lipid-transfer protein {ECO:0000313|EMBL:AJA11729.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
nonspecific lipid-transfer protein
SCNpilot_cont_500_bf_scaffold_4850_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13479..13937
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00035CB4B3
Uncharacterized protein {ECO:0000313|EMBL:AJA11728.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein; K07068
SCNpilot_cont_500_bf_scaffold_4850_16
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13942..14379
DNA (438bp) protein (146aa)
acyl-CoA dehydrogenase n=1 Tax=Henriciella marina RepID=UPI00036311ED
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJA11727.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
acyl-CoA dehydrogenase
Displaying 16 items

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