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SCNpilot_cont_500_bf_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_155_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..152
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028A3E7E
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26872.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_500_bf_scaffold_155_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225..671
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=K9CLA2_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU72658.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_155_3
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

998..1345
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB01
Uncharacterized protein {ECO:0000313|EMBL:AJR25301.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_155_4
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1788..2936
DNA (1149bp) protein (383aa)
UPI0003D5C534 related cluster n=1 Tax=unknown RepID=UPI0003D5C534 rbh
Transporter {ECO:0000313|EMBL:EXS70592.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
outer membrane efflux protein
SCNpilot_cont_500_bf_scaffold_155_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2933..4147
DNA (1215bp) protein (405aa)
RND transporter n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289F5F5
Cation efflux system protein CusB {ECO:0000313|EMBL:GAD49699.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
cusB; copper efflux system membrane protein CusB; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
SCNpilot_cont_500_bf_scaffold_155_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4144..5919
DNA (1776bp) protein (592aa)
cation transporter n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288AEFD
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:KGB56013.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
SCNpilot_cont_500_bf_scaffold_155_7
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5894..7237
DNA (1344bp) protein (448aa)
cation transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD22A
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_cont_500_bf_scaffold_155_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8111..10039
DNA (1929bp) protein (643aa)
Vitamin K epoxide reductase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ11_SPHAL rbh
vitamin K epoxide reductase rbh
Vitamin K epoxide reductase {ECO:0000313|EMBL:ABF54261.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_cont_500_bf_scaffold_155_9
unknown

Not on your lists

10094..10294
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_155_10
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10342..12372)
DNA (2031bp) protein (677aa)
iron permease n=1 Tax=Sphingomonas melonis RepID=UPI00036DCC67
Iron permease {ECO:0000313|EMBL:KHA65719.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
high-affinity iron transporter; K07243 high-affinity iron transporter
SCNpilot_cont_500_bf_scaffold_155_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13612..14142
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D0Y1_SPHYA
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14519.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_155_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14966..16279
DNA (1314bp) protein (438aa)
type II restriction enzyme NmeDIP n=1 Tax=Sphingomonas melonis RepID=UPI000367A04F
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26885.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_155_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16344..16931
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035E1666
DNA, contig: SP670 {ECO:0000313|EMBL:GAN15869.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_155_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16922..17167
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037EBA83
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26884.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_500_bf_scaffold_155_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17253..17585
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D506_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU72665.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_155_16
unknown

Not on your lists

17901..18218
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_155_17
unknown

Not on your lists

18498..18671
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_155_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18940..19185)
DNA (246bp) protein (82aa)
membrane protein n=1 Tax=Sphingomonas melonis RepID=UPI00036D1C93
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15831.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
glutaredoxin
SCNpilot_cont_500_bf_scaffold_155_19
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19354..19599
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MK33_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW17099.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
transposase
SCNpilot_cont_500_bf_scaffold_155_20
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19631..21052)
DNA (1422bp) protein (474aa)
transposase IS66 n=1 Tax=Sphingobium xenophagum RepID=UPI000363D7A4
Mobile element protein {ECO:0000313|EMBL:EZP79889.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
transposase IS66
SCNpilot_cont_500_bf_scaffold_155_21
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21057..22256
DNA (1200bp) protein (400aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJC8_9SPHN rbh
Mobile element protein {ECO:0000313|EMBL:CCW17315.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
transposase for insertion sequence element ISRM3 rbh
SCNpilot_cont_500_bf_scaffold_155_22
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22246..22602)
DNA (357bp) protein (119aa)
transposase IS66 n=1 Tax=Sphingobium xenophagum RepID=UPI00035FD2D9
Mobile element protein {ECO:0000313|EMBL:EZP79889.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
transposase IS66
SCNpilot_cont_500_bf_scaffold_155_23
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22674..23015)
DNA (342bp) protein (114aa)
IS66 Orf2 family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VHC5_SPHWW
IS66 Orf2 family protein; K07484 transposase
IS66 Orf2 family protein {ECO:0000313|EMBL:ABQ71691.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_155_24
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23012..23368)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036ED299
transposase IS3/IS911 family protein; K07483 transposase
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABZ74503.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_500_bf_scaffold_155_25
unknown

Not on your lists

comp(23487..23741)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_155_26
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23817..25055)
DNA (1239bp) protein (413aa)
UPI0003D634E3 related cluster n=1 Tax=unknown RepID=UPI0003D634E3
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ETI62698.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
sodium/calcium exchanger membrane region; K07301 inner membrane protein rbh
SCNpilot_cont_500_bf_scaffold_155_27
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25066..25413)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9BE8
Uncharacterized protein {ECO:0000313|EMBL:KDP94882.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
hypothetical protein; K09137 hypothetical protein
SCNpilot_cont_500_bf_scaffold_155_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25686..26834)
DNA (1149bp) protein (383aa)
Transposase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMR2_9RHIZ
Transposase {ECO:0000313|EMBL:EHK57981.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative transposase
SCNpilot_cont_500_bf_scaffold_155_29
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26885..30139)
DNA (3255bp) protein (1085aa)
cation transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9BE9 rbh
Cation transporter {ECO:0000313|EMBL:ETI65152.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
heavy metal efflux pump CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
SCNpilot_cont_500_bf_scaffold_155_30
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30143..31303)
DNA (1161bp) protein (387aa)
metal transporter n=1 Tax=Sphingomonas wittichii RepID=UPI000319E781 rbh
Metal transporter {ECO:0000313|EMBL:KKC25598.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
Displaying items 1-30 of 132 in total

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