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SCNpilot_cont_500_bf_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_192_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..443
DNA (441bp) protein (147aa)
TonB-dependent receptor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MXF2_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KHS44439.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_192_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

452..1423
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003627507 rbh
Sphingomonas taxi strain 30a NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30143.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
esterase/lipase-like protein rbh
SCNpilot_cont_500_bf_scaffold_192_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1423..3015
DNA (1593bp) protein (531aa)
glycoside hydrolase family protein n=1 Tax=Sphingomonas elodea RepID=UPI000263091D
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:AJP74479.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
glycoside hydrolase family protein
SCNpilot_cont_500_bf_scaffold_192_4
unknown

Not on your lists

comp(2996..3166)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_192_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3547..3768
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H2D9_PSEAC
Ferrichrome-iron receptor {ECO:0000313|EMBL:CEL27021.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Ferrichrome-iron receptor
SCNpilot_cont_500_bf_scaffold_192_6

Not on your lists

comp(3811..4818)
DNA (1008bp) protein (336aa)
Periplasmic binding protein-like domain n=1 Tax=uncultured organism RepID=T1W8Z0_9ZZZZ rbh
Periplasmic binding protein-like domain {ECO:0000313|EMBL:AGU10964.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
transcriptional regulator, LacI family; K05499 LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG rbh
SCNpilot_cont_500_bf_scaffold_192_7

Not on your lists

4923..6170
DNA (1248bp) protein (416aa)
Nucleoside H+ symporter n=1 Tax=uncultured organism RepID=T1WA23_9ZZZZ
Nucleoside H+ symporter {ECO:0000313|EMBL:AGU10965.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
nucleoside:H symporter rbh
SCNpilot_cont_500_bf_scaffold_192_8

Not on your lists

6176..7237
DNA (1062bp) protein (354aa)
Inosose isomerase (EC:5.3.99.-) rbh
Xylose isomerase-like TIM barrel n=1 Tax=uncultured organism RepID=T1W8H6_9ZZZZ
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:AGU10966.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
SCNpilot_cont_500_bf_scaffold_192_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7234..8412
DNA (1179bp) protein (393aa)
oxidoreductase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6BC39
Oxidoreductase {ECO:0000313|EMBL:AJP71260.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
oxidoreductase domain-containing protein
SCNpilot_cont_500_bf_scaffold_192_10

Not on your lists

8409..8777
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W897_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU10968.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
cytochrome c2; K08738 cytochrome c
SCNpilot_cont_500_bf_scaffold_192_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8805..9374
DNA (570bp) protein (190aa)
Gluconate 2-dehydrogenase subunit 3 n=1 Tax=uncultured organism RepID=T1W8I1_9ZZZZ
Transcriptional initiation protein Tat {ECO:0000313|EMBL:AJP74266.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_192_12

Not on your lists

9371..10207
DNA (837bp) protein (279aa)
Xylose isomerase-like TIM barrel n=1 Tax=uncultured organism RepID=T1W7M0_9ZZZZ
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:AGU10972.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
xylose isomerase domain-containing protein
SCNpilot_cont_500_bf_scaffold_192_13
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10233..11906
DNA (1674bp) protein (558aa)
GMC family oxidoreductase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000362F40B
GMC family oxidoreductase {ECO:0000313|EMBL:KEZ18325.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
Oxidoreductase, GMC family protein
SCNpilot_cont_500_bf_scaffold_192_14
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12010..13416
DNA (1407bp) protein (469aa)
malonyl-CoA decarboxylase; K01578 malonyl-CoA decarboxylase [EC:4.1.1.9]
Malonyl-CoA decarboxylase {ECO:0000313|EMBL:ABL69817.1}; EC=4.1.1.9 {ECO:0000313|EMBL:ABL69817.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
MCD, Malonyl-CoA decarboxylase MCD n=1 Tax=Paracoccus sp. N5 RepID=UPI0003613581
SCNpilot_cont_500_bf_scaffold_192_15
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13272..14402)
DNA (1131bp) protein (377aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
Carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
hypothetical protein, partial n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B427AC
SCNpilot_cont_500_bf_scaffold_192_16
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14952..16478)
DNA (1527bp) protein (509aa)
malonyl-CoA synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4E601
Malonyl-CoA synthase {ECO:0000313|EMBL:KHS46085.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
AMP-dependent synthetase/ligase
SCNpilot_cont_500_bf_scaffold_192_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16609..17289
DNA (681bp) protein (227aa)
GntR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B41200
GntR family transcriptional regulator {ECO:0000313|EMBL:KHS46086.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_192_18
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17317..17679
DNA (363bp) protein (121aa)
malonate carrier protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5F66A
Malonate carrier protein {ECO:0000313|EMBL:EIZ79844.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
malonate transporter subunit MadL
SCNpilot_cont_500_bf_scaffold_192_19
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17676..18437
DNA (762bp) protein (254aa)
malonate transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B76E83 rbh
malonate transporter subunit MadM rbh
Malonate transporter, MadM subunit {ECO:0000313|EMBL:ACL58079.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_192_20
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18676..21021
DNA (2346bp) protein (782aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B64DD4
Uncharacterized protein {ECO:0000313|EMBL:AJA09279.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_192_21
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21002..21370)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003690FDB
Hydantoinase
Hydantoinase {ECO:0000313|EMBL:ACJ01052.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_500_bf_scaffold_192_22
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21662..22915)
DNA (1254bp) protein (418aa)
Sugar transporter family protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W0B7_9SPHN rbh
Sugar transporter family protein {ECO:0000313|EMBL:EJU13743.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
sugar transporter family protein
SCNpilot_cont_500_bf_scaffold_192_23
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22976..24124)
DNA (1149bp) protein (383aa)
ester cyclase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6276A rbh
Putative ester cyclase {ECO:0000313|EMBL:EZP82851.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
SnoaL-like polyketide cyclase.
SCNpilot_cont_500_bf_scaffold_192_24
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24153..24884)
DNA (732bp) protein (244aa)
Alpha/beta hydrolase fold protein (Fragment) n=1 Tax=Sphingomonas sp. LH128 RepID=J8VUR6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP82850.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_500_bf_scaffold_192_25
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25070..26092
DNA (1023bp) protein (341aa)
Cupin 2 domain-containing protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VKP9_9SPHN rbh
Cupin 2 domain-containing protein {ECO:0000313|EMBL:EZP82849.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
cupin 2 domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_192_26
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26328..27623)
DNA (1296bp) protein (432aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VEF0_9SPHN rbh
SCNpilot_cont_500_bf_scaffold_192_27
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27792..28832
DNA (1041bp) protein (347aa)
LacI family transcription regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6DF4E rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EZP82845.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_192_28
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29077..31380
DNA (2304bp) protein (768aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6E84F rbh
TonB-dependent receptor {ECO:0000313|EMBL:EZP82844.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_192_29
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31569..32909)
DNA (1341bp) protein (447aa)
Amidase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VLP1_9SPHN rbh
Amidase {ECO:0000313|EMBL:EZP82843.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
SCNpilot_cont_500_bf_scaffold_192_30
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32902..33699)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W041_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EJU13668.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
HpcH/HpaI aldolase
Displaying items 1-30 of 110 in total

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