name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_378_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
173..2200
|
Conjugal transfer coupling protein TraG n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5H9_9SPHN
rbh
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:ENY82802.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4
|
|
SCNpilot_cont_500_bf_scaffold_378_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2203..2601
|
Helix-turn-helix protein, CopG n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH68_9SPHN
Helix-turn-helix protein, CopG {ECO:0000313|EMBL:ENY82801.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Helix-turn-helix protein, CopG
|
|
SCNpilot_cont_500_bf_scaffold_378_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2598..3584
|
conjugal transfer protein TrbB n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEC6
rbh
Conjugal transfer protein TrbB {ECO:0000313|EMBL:ENY82800.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
|
|
SCNpilot_cont_500_bf_scaffold_378_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3587..3922
|
Conjugal transfer protein TrbC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX20_9SPHN
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ENY82799.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
|
|
SCNpilot_cont_500_bf_scaffold_378_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3919..4182
|
conjugal transfer protein TrbD n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEC4
Conjugal transfer protein TrbD {ECO:0000313|EMBL:ENY82798.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3
|
|
SCNpilot_cont_500_bf_scaffold_378_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4176..6602
|
conjugal transfer protein TrbE n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEC3
rbh
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:ENY82797.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbE; K03199 type IV secretion system protein VirB4
rbh
|
|
SCNpilot_cont_500_bf_scaffold_378_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6625..7350
|
conjugal transfer protein TrbJ n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEC2
rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:ENY82796.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbJ
rbh
|
|
SCNpilot_cont_500_bf_scaffold_378_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7468..8772
|
conjugal transfer protein TrbL n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEC1
rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:ENY82795.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
|
|
SCNpilot_cont_500_bf_scaffold_378_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8772..9590
|
Conjugal transfer protein TrbF n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX16_9SPHN
rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:ENY82794.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
|
|
SCNpilot_cont_500_bf_scaffold_378_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9587..10531
|
P-type conjugative transfer protein TrbG n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGI4_9SPHN
rbh
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:ENY82793.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbG; K03204 type IV secretion system protein VirB9
|
|
SCNpilot_cont_500_bf_scaffold_378_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10528..11727
|
Conjugal transfer protein TrbI n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5H2_9SPHN
rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:ENY82792.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
rbh
|
|
SCNpilot_cont_500_bf_scaffold_378_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11729..11959
|
UPI0003D5C9F6 related cluster n=1 Tax=unknown RepID=UPI0003D5C9F6
Uncharacterized protein {ECO:0000313|EMBL:ETI65307.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_378_13
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11956..12156
|
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003748E71
Uncharacterized protein {ECO:0000313|EMBL:EQB33258.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_378_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12130..13464)
|
serine kinase HipA; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
HipA N-terminal domain protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWP7_METTR
rbh
HipA protein {ECO:0000313|EMBL:EJW10829.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
|
|
SCNpilot_cont_500_bf_scaffold_378_15
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13461..13751)
|
Putative transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J3ABB4_9SPHN
Putative transcriptional regulator {ECO:0000313|EMBL:EJL28679.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_378_16
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13896..15128)
|
integrase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEB9
rbh
Integrase {ECO:0000313|EMBL:ETI65309.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
putative integrase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_378_17
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15305..16729
|
recombinase n=1 Tax=Sphingobium chinhatense RepID=UPI00037220DE
rbh
Recombinase {ECO:0000313|EMBL:KER36603.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
putative phage integrase
|
|
SCNpilot_cont_500_bf_scaffold_378_18
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16704..16892)
|
UPI0003D5E888 related cluster n=1 Tax=unknown RepID=UPI0003D5E888
Excisionase {ECO:0000313|EMBL:ETI64177.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_378_19
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16889..17104)
|
DNA-binding protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JA67_9SPHN
DNA-binding protein {ECO:0000313|EMBL:KEZ21164.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
phage transcriptional regulator, AlpA; K07733 prophage regulatory protein
|
|
SCNpilot_cont_500_bf_scaffold_378_20
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17589..18011
|
Toxin RelE n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HDT4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA11167.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_378_21
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17989..18321
|
DNA-binding protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HIZ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA11166.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
XRE family transcriptional regulator; K07726 putative transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_378_22
unknown
|
Not on your lists |
comp(18416..18796)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_378_23
unknown
|
Not on your lists |
18903..20171
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_378_24
unknown
|
Not on your lists |
20211..20771
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_378_25
unknown
|
Not on your lists |
comp(20701..21291)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_378_26
unknown
|
Not on your lists |
comp(21288..22736)
|
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003473354
rbh
|
|
SCNpilot_cont_500_bf_scaffold_378_27
unknown
|
Not on your lists |
comp(22733..23116)
|
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347133A
|
|
SCNpilot_cont_500_bf_scaffold_378_28
unknown
|
Not on your lists |
23299..24069
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_378_29
unknown
|
Not on your lists |
24159..24521
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_378_30
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24637..24957)
|
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0G1I4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EPR18033.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
conjugal transfer TraD family protein
|