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SCNpilot_cont_500_bf_scaffold_392

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_392_1
unknown

Not on your lists

comp(2..127)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_392_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241..1008
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBN5_SPHWW
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB56757.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_392_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1122..1556)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S667_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB56756.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_392_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1560..2729)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SLA0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KGB56755.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_392_5
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2823..3911)
DNA (1089bp) protein (363aa)
LuxR family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EC9 rbh
Regulatory protein LuxR {ECO:0000313|EMBL:KGB56754.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
regulatory protein LuxR
SCNpilot_cont_500_bf_scaffold_392_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4057..4962
DNA (906bp) protein (302aa)
alpha/beta hydrolase domain-containing protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488ECA
alpha/beta hydrolase domain-containing protein
Alpha/beta hydrolase domain-containing protein {ECO:0000313|EMBL:AGH51356.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_392_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5117..5893)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DE23_9PROT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB56752.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_392_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6034..7116
DNA (1083bp) protein (361aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4A6_9SPHN rbh
Rieske (2Fe-2S) domain-containing protein rbh
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AGH50596.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_392_9
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7253..8041
DNA (789bp) protein (263aa)
3-alpha-hydroxysteroid dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024885B2 rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB56750.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_392_10
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8046..8807
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBG9_SPHWW rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AHE53303.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_392_11
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8829..9278
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024885B4
Uncharacterized protein {ECO:0000313|EMBL:KGB56748.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_392_12
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9465..10244
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5P1_9SPHN rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB56746.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_392_13
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10247..11335
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBH2_SPHWW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ69638.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_392_14
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11332..11802
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SLD9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB56744.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_392_15
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11973..12440)
DNA (468bp) protein (156aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RY65_9SPHN
AsnC family transcriptional regulator {ECO:0000313|EMBL:KGB56743.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_392_16
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12437..12955)
DNA (519bp) protein (173aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BB76
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KGB56742.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
AsnC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_392_17
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13118..14803
DNA (1686bp) protein (562aa)
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; K05898 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
Putative 3-oxosteroid 1-dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YA71_9SPHN
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein {ECO:0000313|EMBL:KGB56741.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
SCNpilot_cont_500_bf_scaffold_392_18
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14800..15657
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I759_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB05459.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
xylose isomerase domain-containing protein
SCNpilot_cont_500_bf_scaffold_392_19
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15663..16784
DNA (1122bp) protein (374aa)
oxidoreductase n=1 Tax=Sphingomonas wittichii RepID=UPI0002F7558A rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ABQ69651.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_392_20
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16781..17137
DNA (357bp) protein (119aa)
Ethyl tert-butyl ether degradation EthD n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBL1_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:AHE53313.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
ethyl tert-butyl ether degradation EthD
SCNpilot_cont_500_bf_scaffold_392_21
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17270..18019)
DNA (750bp) protein (250aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas wittichii RepID=UPI0002F6E9C6 rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB56739.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_392_22
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18143..19339)
DNA (1197bp) protein (399aa)
acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036683AD
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGB56738.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
acetyl-CoA acetyltransferase
SCNpilot_cont_500_bf_scaffold_392_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19343..19720)
DNA (378bp) protein (126aa)
Steroid delta-isomerase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SDH2_9SPHN
steroid delta-isomerase
Steroid delta-isomerase {ECO:0000313|EMBL:AGH48697.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_392_24
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19728..20192)
DNA (465bp) protein (155aa)
MaoC domain protein dehydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFB2_NOVAD
dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ABP64623.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_392_25
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20189..20968)
DNA (780bp) protein (260aa)
short chain dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFB1_NOVAD rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP64622.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_392_26
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20965..21882)
DNA (918bp) protein (306aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EE6 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE54642.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
short chain dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_392_27
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21882..23033)
DNA (1152bp) protein (384aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AHE54640.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AHE54640.1};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
acetyl-CoA C-acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA C-acetyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ID70_9SPHN rbh
SCNpilot_cont_500_bf_scaffold_392_28
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23026..23997)
DNA (972bp) protein (324aa)
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EE9
Uncharacterized protein {ECO:0000313|EMBL:AHE54639.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_500_bf_scaffold_392_29
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23997..25157)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2H3_9SPHN rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AGH48689.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_392_30
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25157..25906)
DNA (750bp) protein (250aa)
Enoyl-CoA hydratase echA20 {ECO:0000313|EMBL:GAO53554.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAO53554.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
enoyl-CoA hydratase n=1 Tax=Sphingomonas wittichii RepID=UPI00031D5CBC
enoyl-CoA hydratase/isomerase rbh
Displaying items 1-30 of 69 in total

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