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SCNpilot_cont_500_bf_scaffold_757

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_757_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(632..2944)
DNA (2313bp) protein (771aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289E6D4
TonB-dependent receptor {ECO:0000313|EMBL:AIT08009.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
TonB-dependent receptor, plug
SCNpilot_cont_500_bf_scaffold_757_2
unknown

Not on your lists

comp(2985..3209)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_757_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3598..4527
DNA (930bp) protein (310aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6US64_9RHIZ
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ENN84535.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
nucleoside-diphosphate-sugar epimerases
SCNpilot_cont_500_bf_scaffold_757_4
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4657..5223)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB5DD
Uncharacterized protein {ECO:0000313|EMBL:EOD67853.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
phaF1; polyhydroxyalkanoate granule-associated protein
SCNpilot_cont_500_bf_scaffold_757_5
unknown

Not on your lists

comp(5572..5772)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_757_6
unknown

Not on your lists

6138..6278
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_757_7
unknown

Not on your lists

6372..6827
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_757_8
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6837..8099)
DNA (1263bp) protein (421aa)
carbohydrate-selective porin OprB n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A8F
carbohydrate-selective porin oprb; K07267 porin
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_500_bf_scaffold_757_9
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8484..9830)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
sensory transduction histidine kinase; K00936 [EC:2.7.3.-]
Sensory transduction histidine kinase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VIG4_9SPHN rbh
SCNpilot_cont_500_bf_scaffold_757_10
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9831..10511)
DNA (681bp) protein (227aa)
UPI0003D60B1D related cluster n=1 Tax=unknown RepID=UPI0003D60B1D rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:ETI65305.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
response regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_cont_500_bf_scaffold_757_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10520..11896)
DNA (1377bp) protein (459aa)
Outer membrane efflux protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPR3_9SPHN rbh
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26031.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Outer membrane efflux protein
SCNpilot_cont_500_bf_scaffold_757_12
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11893..15042)
DNA (3150bp) protein (1050aa)
Acriflavin resistance protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SIF0_9SPHN rbh
Scaffold7, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31921.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
acriflavin resistance protein
SCNpilot_cont_500_bf_scaffold_757_13
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15042..16019)
DNA (978bp) protein (326aa)
Membrane fusion protein MtrC n=1 Tax=Sphingomonas sp. LH128 RepID=J8VX31_9SPHN rbh
Membrane fusion protein MtrC {ECO:0000313|EMBL:EJU12603.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_757_14
unknown

Not on your lists

16214..16603
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_757_15
unknown

Not on your lists

comp(16748..16975)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_757_16
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17185..18204)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICE4_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA89969.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_500_bf_scaffold_757_17
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18693..19445
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U5V8_MYXSD
Matrixin family protein {ECO:0000313|EMBL:KIN92473.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_757_18
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19569..20129
DNA (561bp) protein (187aa)
pilus biosynthesis protein TadE n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B36A5C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11151.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_500_bf_scaffold_757_19
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20126..20695
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC545
Uncharacterized protein {ECO:0000313|EMBL:CCW20286.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_757_20
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20698..22080
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MXQ7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW20287.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_757_21
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22444..23034
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0U2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48074.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_757_22
unknown

Not on your lists

comp(23649..24410)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003785882
hypothetical protein
SCNpilot_cont_500_bf_scaffold_757_23
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25192..25749
DNA (558bp) protein (186aa)
UPI0003D69973 related cluster n=1 Tax=unknown RepID=UPI0003D69973
Phosphoesterase {ECO:0000313|EMBL:ETI65289.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
phosphoesterase PA-phosphatase-like protein
SCNpilot_cont_500_bf_scaffold_757_24
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26066..26869
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036AD737 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD24705.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_500_bf_scaffold_757_25
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26986..28362)
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
histidine kinase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD17E rbh
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_757_26
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28349..29026)
DNA (678bp) protein (226aa)
transcriptional regulator n=1 Tax=Sphingobium RepID=UPI000262B7AE rbh
Transcriptional regulator {ECO:0000313|EMBL:KFD27663.1}; Two-component response regulator {ECO:0000313|EMBL:KEZ14389.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
response regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_cont_500_bf_scaffold_757_27
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29183..29500
DNA (318bp) protein (106aa)
Propeptide PepSY amd peptidase M4 n=1 Tax=Sphingomonas sp. LH128 RepID=J8VMF2_9SPHN
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:EJU13912.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
propeptide PepSY amd peptidase M4
SCNpilot_cont_500_bf_scaffold_757_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30334..30705)
DNA (372bp) protein (124aa)
Transcriptional regulator helix turn helix domain protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVS4_9RHIZ
Transcriptional regulator helix turn helix domain protein {ECO:0000313|EMBL:EHK55196.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_757_29
unknown

Not on your lists

comp(30695..30901)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_757_30
unknown

Not on your lists

comp(31406..32068)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028886BA
Displaying items 1-30 of 34 in total

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