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SCNpilot_cont_500_bf_scaffold_823

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_823_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..208)
DNA (207bp) protein (69aa)
molecular chaperone GroEL n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488B27
groEL; chaperonin GroEL; K04077 chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
SCNpilot_cont_500_bf_scaffold_823_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265..555)
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SKE0_9SPHN
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
molecular chaperone GroES
SCNpilot_cont_500_bf_scaffold_823_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(684..2144)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381BC69
MATE efflux family protein {ECO:0000313|EMBL:ENY81683.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MATE efflux family protein; K03327 multidrug resistance protein, MATE family
SCNpilot_cont_500_bf_scaffold_823_4
unknown

Not on your lists

2365..2664
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_823_5
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2564..4096)
DNA (1533bp) protein (511aa)
glycosyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC928 rbh
hypothetical protein
Tax=GWC2_Elusimicrobia_64_44_curated
SCNpilot_cont_500_bf_scaffold_823_6
unknown

Not on your lists

4305..4415
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_823_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4459..5202
DNA (744bp) protein (248aa)
Crp family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJD2_9SPHN
Crp family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Crp family transcriptional regulator {ECO:0000313|EMBL:BAK64802.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_500_bf_scaffold_823_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5189..5656)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJD3_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64803.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_500_bf_scaffold_823_9
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5810..6349)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037998AA
Superoxide dismutase {ECO:0000313|EMBL:KHA63273.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
Cu/Zn superoxide dismutase
SCNpilot_cont_500_bf_scaffold_823_10
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6416..7294)
DNA (879bp) protein (293aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4EAC0 rbh
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KHS47843.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
CDP-alcohol phosphatidyltransferase
SCNpilot_cont_500_bf_scaffold_823_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7417..8526
DNA (1110bp) protein (370aa)
Inositol-1-phosphate synthase {ECO:0000313|EMBL:GAO54335.1}; EC=5.5.1.4 {ECO:0000313|EMBL:GAO54335.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] rbh
inositol-3-phosphate synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B605A6 rbh
SCNpilot_cont_500_bf_scaffold_823_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8523..9218
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D6787
CTP:Inositol-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:GAO54336.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
nucleotidyl transferase
SCNpilot_cont_500_bf_scaffold_823_13
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9265..9789)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IKM9_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK64759.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_cont_500_bf_scaffold_823_14
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9782..10231)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T8D5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27976.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_500_bf_scaffold_823_15
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10228..10551)
DNA (324bp) protein (108aa)
Regulatory protein ArsR n=6 Tax=Rhizobium meliloti RepID=F6BXJ3_SINMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH82711.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_500_bf_scaffold_823_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10765..12057)
DNA (1293bp) protein (431aa)
branched-chain alpha-keto acid dehydrogenase subunit E2; K09699 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036E9D3F rbh
Sphingomonas taxi strain 30a NODE_71, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27175.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_500_bf_scaffold_823_17
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12064..13128)
DNA (1065bp) protein (355aa)
bkdA2; 2-oxoisovalerate dehydrogenase beta subunit (EC:1.2.4.4); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]
2-oxoisovalerate dehydrogenase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AD240
Branched-chain alpha-keto acid dehydrogenase E1 component beta subunit {ECO:0000313|EMBL:GAM00510.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_500_bf_scaffold_823_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13128..14411)
DNA (1284bp) protein (428aa)
bkdA1; 2-oxoisovalerate dehydrogenase alpha subunit (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035D429E rbh
2-oxoisovalerate dehydrogenase {ECO:0000313|EMBL:KHA63765.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_500_bf_scaffold_823_19
unknown

Not on your lists

comp(14672..14980)
DNA (309bp) protein (103aa)
pilus assembly protein PilZ n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3FCC7
SCNpilot_cont_500_bf_scaffold_823_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15115..15861)
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E293E8 rbh
Membrane protein {ECO:0000313|EMBL:EZP70879.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein; K06890
SCNpilot_cont_500_bf_scaffold_823_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15922..16557
DNA (636bp) protein (212aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00038200E9
hypothetical protein
SCNpilot_cont_500_bf_scaffold_823_22
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16683..18068)
DNA (1386bp) protein (462aa)
ribonuclease n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA64D
ribonuclease
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_500_bf_scaffold_823_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18169..19353
DNA (1185bp) protein (395aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B79030 rbh
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29361.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_500_bf_scaffold_823_24
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19424..20092
DNA (669bp) protein (223aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
LexA repressor (EC:3.4.21.88)
LexA family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF69
SCNpilot_cont_500_bf_scaffold_823_25
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20083..22359)
DNA (2277bp) protein (759aa)
competence protein ComEC n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF67
ComEC/Rec2-like protein; K02238 competence protein ComEC
ComEC/Rec2-like protein {ECO:0000313|EMBL:AGH48283.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_823_26
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22614..24041
DNA (1428bp) protein (476aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
glutamyl-tRNA synthetase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003750BF5
gltX; glutamyl-tRNA ligase rbh
SCNpilot_cont_500_bf_scaffold_823_27
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24061..25344
DNA (1284bp) protein (428aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1]
type II citrate synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036CDDC6 rbh
SCNpilot_cont_500_bf_scaffold_823_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25585..26937)
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:AJP71831.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C2469 rbh
histidine kinase
SCNpilot_cont_500_bf_scaffold_823_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26934..28010)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035EDCC4
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29366.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_823_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28119..29300)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3CB83
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29367.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
Displaying items 1-30 of 34 in total

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