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SCNpilot_cont_500_bf_scaffold_852

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_852_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2099
DNA (2097bp) protein (699aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Sphingomonas sp. S17 RepID=F3X0W1_9SPHN
SCNpilot_cont_500_bf_scaffold_852_2
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2419..3480
DNA (1062bp) protein (354aa)
SAM-dependent methyltransferase PhcB n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B62226 rbh
Methyltransferase type 12 {ECO:0000313|EMBL:KFG90252.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
type 12 methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_852_3
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3629..4402)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B1C90
Class II aldolase/adducin family protein {ECO:0000313|EMBL:EZP55505.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
class II aldolase/adducin domain-containing protein
SCNpilot_cont_500_bf_scaffold_852_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4648..7266
DNA (2619bp) protein (873aa)
ATPase AAA n=1 Tax=Sphingomonas melonis RepID=UPI000364B2BD rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
clpB; chaperone protein ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
SCNpilot_cont_500_bf_scaffold_852_5
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7435..10386
DNA (2952bp) protein (984aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035C6BB7 rbh
TonB-dependent receptor rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCNpilot_cont_500_bf_scaffold_852_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10489..12000)
DNA (1512bp) protein (504aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VB24_SPHWW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC25508.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_cont_500_bf_scaffold_852_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12023..12280)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VB22_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69488.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_852_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12359..13516)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002FC32D8 rbh
aspartyl/asparaginyl beta-hydroxylase rbh
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:ABQ69491.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_500_bf_scaffold_852_9
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13513..15576)
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000360F13F rbh
sulfotransferase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCNpilot_cont_500_bf_scaffold_852_10
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15645..18851)
DNA (3207bp) protein (1069aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003114049 rbh
TonB-dependent receptor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCNpilot_cont_500_bf_scaffold_852_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19000..19536
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B557A5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49400.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_852_12
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19645..22794)
DNA (3150bp) protein (1050aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003114049
TonB-dependent receptor rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCNpilot_cont_500_bf_scaffold_852_13
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23343..24203)
DNA (861bp) protein (287aa)
peptidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B57FB8
Peptidase M23 family protein {ECO:0000313|EMBL:EZP56167.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
peptidase M23B
SCNpilot_cont_500_bf_scaffold_852_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24200..24400)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC0D
Uncharacterized protein {ECO:0000313|EMBL:AIT07314.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_852_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24415..25779)
DNA (1365bp) protein (455aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
exodeoxyribonuclease VII large subunit n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6DB67 rbh
exodeoxyribonuclease VII large subunit rbh
SCNpilot_cont_500_bf_scaffold_852_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25788..27029
DNA (1242bp) protein (414aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138, ECO:0000313|EMBL:AJP73939.1}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
phosphoribosylamine--glycine ligase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B44D84 rbh
SCNpilot_cont_500_bf_scaffold_852_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27089..27670
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000367820A
Sphingomonas taxi strain 30a NODE_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26506.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_852_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27773..28696
DNA (924bp) protein (308aa)
molecular chaperone DnaJ n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B76DE6 rbh
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26212.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
dnaJ; DnaJ-class molecular chaperone rbh
SCNpilot_cont_500_bf_scaffold_852_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28845..29801
DNA (957bp) protein (319aa)
ribonuclease BN n=1 Tax=Sphingomonas melonis RepID=UPI00036A7752
Ribonuclease BN {ECO:0000313|EMBL:AIT08158.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ribonuclease BN
SCNpilot_cont_500_bf_scaffold_852_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29810..30601
DNA (792bp) protein (264aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
enoyl-ACP reductase n=1 Tax=Sphingomonas melonis RepID=UPI000382336E rbh
enoyl-ACP reductase
SCNpilot_cont_500_bf_scaffold_852_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30601..31125
DNA (525bp) protein (175aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI0003805824
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26210.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
putative acetyltransferase
SCNpilot_cont_500_bf_scaffold_852_22
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31122..32189
DNA (1068bp) protein (356aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
aroC; chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5]
chorismate synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D5375 rbh
SCNpilot_cont_500_bf_scaffold_852_23
unknown

Not on your lists

32505..32798
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Neospora caninum (strain Liverpool) RepID=F0VID4_NEOCL
SCNpilot_cont_500_bf_scaffold_852_24
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32891..33985)
DNA (1095bp) protein (365aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
adenylosuccinate synthetase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B46613
adenylosuccinate synthetase
SCNpilot_cont_500_bf_scaffold_852_25
unknown

Not on your lists

comp(33982..34080)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_852_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34202..35296)
DNA (1095bp) protein (365aa)
tRNA synthetase class II n=1 Tax=Sphingomonas melonis RepID=UPI0003740BBE
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26241.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hisZ; ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit
SCNpilot_cont_500_bf_scaffold_852_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35472..37049)
DNA (1578bp) protein (526aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
3-phosphoglycerate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI00037A97B2
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26206.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_500_bf_scaffold_852_28
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37154..37531)
DNA (378bp) protein (126aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52]
phosphoserine aminotransferase n=1 Tax=Sphingobium xenophagum RepID=UPI00037CB107
SCNpilot_cont_500_bf_scaffold_852_29
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37471..38223)
DNA (753bp) protein (251aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52]
phosphoserine aminotransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000319EF83
SCNpilot_cont_500_bf_scaffold_852_30
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38505..39134
DNA (630bp) protein (210aa)
extensin family protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B77BE7 rbh
Extensin {ECO:0000313|EMBL:KHA64238.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
extensin-like protein
Displaying items 1-30 of 101 in total

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