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SCNpilot_cont_500_bf_scaffold_960

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_960_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..362
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2Q4_9SPHN
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26898.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

359..733
DNA (375bp) protein (125aa)
Putative lipoprotein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2Q3_9SPHN
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26899.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

779..1120
DNA (342bp) protein (114aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Sphingomonas sp. S17 RepID=F3X2Q2_9SPHN
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE
SCNpilot_cont_500_bf_scaffold_960_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1152..2039
DNA (888bp) protein (296aa)
Uncharacterized family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2Q1_9SPHN rbh
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26901.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein; K08994 putative membrane protein
SCNpilot_cont_500_bf_scaffold_960_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2039..2428
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2Q0_9SPHN
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26902.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2432..3118
DNA (687bp) protein (229aa)
Putative membrane protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2P9_9SPHN rbh
DNA, contig: SP671 {ECO:0000313|EMBL:GAN15885.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein; K07238 zinc transporter, ZIP family
SCNpilot_cont_500_bf_scaffold_960_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3115..3789
DNA (675bp) protein (225aa)
Cation efflux family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2P8_9SPHN rbh
DNA, contig: SP671 {ECO:0000313|EMBL:GAN15886.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
putative CDF-family cation efflux system protein rbh
SCNpilot_cont_500_bf_scaffold_960_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3786..6164
DNA (2379bp) protein (793aa)
cation transport ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Cadmium-translocating P-type ATPase n=1 Tax=Sphingomonas sp. S17 RepID=F3X2P7_9SPHN
DNA, contig: SP671 {ECO:0000313|EMBL:GAN15887.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_960_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6161..6910
DNA (750bp) protein (250aa)
HAD-superhydrolase, subIIB family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2P6_9SPHN rbh
DNA, contig: SP671 {ECO:0000313|EMBL:GAN15888.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
phosphomannomutase; K07024
SCNpilot_cont_500_bf_scaffold_960_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7024..7479
DNA (456bp) protein (152aa)
transporter n=1 Tax=Sphingomonas melonis RepID=UPI00036DC993 rbh
Sphingomonas taxi strain 30a NODE_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30398.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_cont_500_bf_scaffold_960_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7476..7955
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2P4_9SPHN
DNA, contig: SP671 {ECO:0000313|EMBL:GAN15890.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_960_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7968..8576
DNA (609bp) protein (203aa)
DedA family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2P3_9SPHN rbh
Sphingomonas taxi strain 30a NODE_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30400.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
DedA family protein
SCNpilot_cont_500_bf_scaffold_960_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8822..9172
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000371416D
Sphingomonas taxi strain 30a NODE_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30401.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_14
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9178..9492
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035DE2B0
DNA, contig: SP679 {ECO:0000313|EMBL:GAN15911.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_960_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9479..9874
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000369AF67
Sphingomonas taxi strain 30a NODE_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30410.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
conserved exported protein of unknown function
SCNpilot_cont_500_bf_scaffold_960_16
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9896..10171)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2P0_9SPHN
DNA, contig: SP679 {ECO:0000313|EMBL:GAN15909.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_960_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10293..13529)
DNA (3237bp) protein (1079aa)
cation transporter n=1 Tax=Sphingomonas melonis RepID=UPI000366A8ED rbh
Sphingomonas taxi strain 30a NODE_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30402.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
heavy metal efflux pump CzcA; K07239 heavy-metal exporter, HME family
SCNpilot_cont_500_bf_scaffold_960_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13526..14680)
DNA (1155bp) protein (385aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingomonas sp. S17 RepID=F3X2N8_9SPHN rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14535.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
metal ion efflux membrane fusion protein family
SCNpilot_cont_500_bf_scaffold_960_19
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14677..15936)
DNA (1260bp) protein (420aa)
Outer membrane efflux family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2N7_9SPHN rbh
CzcC protein {ECO:0000313|EMBL:GAN15807.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_500_bf_scaffold_960_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16120..16344
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000372D566
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15808.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_960_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16688..17812)
DNA (1125bp) protein (375aa)
High-affinity nickel-transport family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2N5_9SPHN rbh
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15809.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
high-affinity nickel-transporter
SCNpilot_cont_500_bf_scaffold_960_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17950..18219
DNA (270bp) protein (90aa)
Uncharacterized BCR, COG1937 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2N4_9SPHN
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15810.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18463..19026
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003778968 rbh
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19084..19281)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037233B0
Sphingomonas taxi strain 30a NODE_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30407.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19278..19595)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000365B8EA
Sphingomonas taxi strain 30a NODE_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30408.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19616..20269)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037F26E3 rbh
Sphingomonas taxi strain 30a NODE_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30409.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_27
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20266..21201)
DNA (936bp) protein (312aa)
antirestriction protein ArdC n=1 Tax=Sphingomonas melonis RepID=UPI000380E39E rbh
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15815.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
ardC; putative antirestriction protein ArdC rbh
SCNpilot_cont_500_bf_scaffold_960_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21641..22264)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037E1AFF rbh
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15816.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_960_29
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22472..23305)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037EDE0B rbh
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15817.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_960_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23428..23706)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003697121
Sphingomonas taxi strain 30a NODE_80, whole genome shotgun sequence {ECO:0000313|EMBL:KIU25844.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
Displaying items 1-30 of 42 in total

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