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SCNpilot_cont_500_bf_scaffold_1582

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1582_1
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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391..4059
DNA (3669bp) protein (1223aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5BC85_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KEZ00685.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC-A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1582_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4625..4981)
DNA (357bp) protein (119aa)
Response regulator receiver protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QA15_RHOPT
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACF03493.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_500_bf_scaffold_1582_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4985..5983)
DNA (999bp) protein (333aa)
histidine kinase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A7D30D
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:ADU46264.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_500_bf_scaffold_1582_4
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6233..8575)
DNA (2343bp) protein (781aa)
copA; cation transport ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Cation transport ATPase n=1 Tax=Sphingobium indicum B90A RepID=I5B990_9SPHN
Haloacid dehalogenase {ECO:0000313|EMBL:EXS70512.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
SCNpilot_cont_500_bf_scaffold_1582_5
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8715..9317
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP29_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93181.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_500_bf_scaffold_1582_6
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9320..9646
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IJ21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11725.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
Cation transporting P-type ATPase
SCNpilot_cont_500_bf_scaffold_1582_7
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9633..9929
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JD50_9ALTE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_500_bf_scaffold_1582_8
unknown

Not on your lists

comp(9899..10381)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1582_9
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10888..11673)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5YS58_MYCSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF36018.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
SCNpilot_cont_500_bf_scaffold_1582_10
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11769..12323
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K415_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31249.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1582_11
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12390..12722)
DNA (333bp) protein (111aa)
UPI0003CEDFB3 related cluster n=2 Tax=unknown RepID=UPI0003CEDFB3
Uncharacterized protein {ECO:0000313|EMBL:ESW86773.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
SCNpilot_cont_500_bf_scaffold_1582_12
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12941..13573
DNA (633bp) protein (211aa)
integrase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000367020A
Integrase {ECO:0000313|EMBL:KGF68627.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
phage integrase
SCNpilot_cont_500_bf_scaffold_1582_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13752..14912
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHD8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGQ19298.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
SCNpilot_cont_500_bf_scaffold_1582_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15058..15879)
DNA (822bp) protein (274aa)
aminoglycoside phosphotransferase; K00897 aminoglycoside 3'-phosphotransferase [EC:2.7.1.95]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035FD98A
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACF51421.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_500_bf_scaffold_1582_15
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16408..17034)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Plautia stali symbiont RepID=U3U4U0_9ENTR
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCNpilot_cont_500_bf_scaffold_1582_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17228..19576)
DNA (2349bp) protein (783aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0N0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34991.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DEAD/DEAH box helicase
Displaying 16 items

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