name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_1996_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(43..660)
|
50S ribosomal protein L4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B510EC
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
rplD; 50S ribosomal protein L4
|
|
SCNpilot_cont_500_bf_scaffold_1996_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(657..1352)
|
50S ribosomal protein L3 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036528A5
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
|
|
SCNpilot_cont_500_bf_scaffold_1996_3
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1674..1898)
|
30S ribosomal protein S10 n=3 Tax=root RepID=F3X0K1_9SPHN
rpsJ; ribosomal protein S10; K02946 small subunit ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
|
|
SCNpilot_cont_500_bf_scaffold_1996_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2089..3279)
|
Elongation factor Tu n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=EFTU_SPHWW
rbh
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_500_bf_scaffold_1996_5
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3424..4266)
|
Elongation factor G n=1 Tax=Sphingobium baderi LL03 RepID=T0GL95_9SPHN
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
fusA; translation elongation factor (GTPase); K02355 elongation factor G
|
|
SCNpilot_cont_500_bf_scaffold_1996_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4278..5444)
|
Elongation factor G n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S029_9SPHN
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
elongation factor G
|
|
SCNpilot_cont_500_bf_scaffold_1996_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5514..5906)
|
30S ribosomal protein S7 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C41BF
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
30S ribosomal protein S7
|
|
SCNpilot_cont_500_bf_scaffold_1996_8 |
Not on your lists |
comp(6083..6454)
|
30S ribosomal protein S12 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B52238
Ribosomal protein S12 {ECO:0000313|EMBL:AGU12245.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
|
|
SCNpilot_cont_500_bf_scaffold_1996_9
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6748..6999
|
Probable plasmid stabilization protein n=2 Tax=Rhizobium etli RepID=B3Q493_RHIE6
Putative toxin-antitoxin system toxin component {ECO:0000313|EMBL:GAJ97136.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
putative plasmid stabilization protein
|
|
SCNpilot_cont_500_bf_scaffold_1996_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7338..8639)
|
Xaa-Pro dipeptidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7B1D7
Amidohydrolase {ECO:0000313|EMBL:ENY79999.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Xaa-Arg/Lys peptidase
|
|
SCNpilot_cont_500_bf_scaffold_1996_11
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8709..9179
|
Glutathione-dependent formaldehyde-activating enzyme family protein n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0A4V1_BURTH
glutathione-dependent formaldehyde-activating enzyme family protein
Glutathione-dependent formaldehyde-activating enzyme family protein {ECO:0000313|EMBL:AJY41818.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2002721687.;"
|
|
SCNpilot_cont_500_bf_scaffold_1996_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9158..10687)
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDBCF
Uncharacterized protein {ECO:0000313|EMBL:AIT08134.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1996_13
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10695..12095)
|
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:AJR25662.1};; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
pdhD; dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
rbh
Dihydrolipoyl dehydrogenase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J574_9SPHN
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1996_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(12095..12304)
|
Strain SA-120 Contig436, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01365.1}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
|
|
SCNpilot_cont_500_bf_scaffold_1996_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12314..13594)
|
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
pdhC; pyruvate dehydrogenase E2 component (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
rbh
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B540D0
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1996_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13699..14151
|
universal stress protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003692372
Universal stress protein {ECO:0000313|EMBL:AIT08136.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
UspA domain-containing protein
|
|
SCNpilot_cont_500_bf_scaffold_1996_17
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14234..15535
|
peptidase M28 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B439D9
Peptidase M28 {ECO:0000313|EMBL:KHA64333.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
peptidase M28
|
|
SCNpilot_cont_500_bf_scaffold_1996_18
unknown
|
Not on your lists |
comp(15561..15905)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1996_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15953..16438)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000381F83F
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28000.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
GAF domain-containing protein; K07170 GAF domain-containing protein
|
|
SCNpilot_cont_500_bf_scaffold_1996_20
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16637..17041)
|
peptide chain release factor I n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003629E41
Peptide chain release factor 1 {ECO:0000313|EMBL:KHA64335.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein; K15034 ribosome-associated protein
|
|
SCNpilot_cont_500_bf_scaffold_1996_21
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17034..17696)
|
Pseudouridine synthase {ECO:0000313|EMBL:EZP54652.1}; EC=5.4.99.- {ECO:0000313|EMBL:EZP54652.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
rbh
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036140D4
|
|
SCNpilot_cont_500_bf_scaffold_1996_22
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17743..18474
|
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI00037466FA
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EZP54651.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
D-alanyl-D-alanine carboxypeptidase
|
|
SCNpilot_cont_500_bf_scaffold_1996_23
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18459..19247)
|
Extradiol ring-cleavage dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W649_9SPHN
Extradiol ring-cleavage dioxygenase III subunit B {ECO:0000313|EMBL:KGB54939.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
extradiol ring-cleavage dioxygenase
|
|
SCNpilot_cont_500_bf_scaffold_1996_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19298..19900)
|
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
NAD(P)H quinone oxidoreductase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB08C
wrbA; TrpR binding protein WrbA; K03809 Trp repressor binding protein
|
|
SCNpilot_cont_500_bf_scaffold_1996_25
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19971..20693)
|
Pirin family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WYG5_9SPHN
Putative pirin-related protein {ECO:0000313|EMBL:GAM00273.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
pirin-related protein; K06911
|
|
SCNpilot_cont_500_bf_scaffold_1996_26
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20788..21675
|
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F1540
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAM00272.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
LysR family transcriptional regulator
|