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SCNpilot_cont_500_bf_scaffold_3473

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3473_1
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..532)
DNA (531bp) protein (177aa)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
Putative thymidine phosphorylase n=1 Tax=Sphingobium baderi LL03 RepID=T0HN49_9SPHN
putative thymidine phosphorylase
SCNpilot_cont_500_bf_scaffold_3473_2
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(529..792)
DNA (264bp) protein (88aa)
Beta-Casp domain-containing protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GAD8_9SPHN
Beta-Casp domain-containing protein {ECO:0000313|EMBL:KFG91505.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
putative exonuclease; K07576 metallo-beta-lactamase family protein
SCNpilot_cont_500_bf_scaffold_3473_3
unknown

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1355..1618
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3473_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2179..2442
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4YY78_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI95310.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_cont_500_bf_scaffold_3473_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2439..3188
DNA (750bp) protein (250aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Sphingobium baderi LL03 RepID=T0GL31_9SPHN rbh
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KEQ54733.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
putative protein-S-isoprenylcysteine methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_3473_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3250..3519
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HT62_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEQ54734.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
SCNpilot_cont_500_bf_scaffold_3473_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4204..4821
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035F6A35
Uncharacterized protein {ECO:0000313|EMBL:AKH18775.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3473_8
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4934..5203
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C6C1
Uncharacterized protein {ECO:0000313|EMBL:AKH18774.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3473_9
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5208..5651)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C6C0
Uncharacterized protein {ECO:0000313|EMBL:KEQ54737.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3473_10
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5705..6199)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003053D3F
Uncharacterized protein {ECO:0000313|EMBL:KKC24051.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3473_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6376..6894
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2A0_9SPHN rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14637.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_3473_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6891..8132
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2A1_9SPHN rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14638.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
TIR protein
SCNpilot_cont_500_bf_scaffold_3473_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8125..9249
DNA (1125bp) protein (375aa)
Phage integrase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2A2_9SPHN rbh
Integrase {ECO:0000313|EMBL:AKH18771.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
putative integrase
SCNpilot_cont_500_bf_scaffold_3473_14
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9340..9924)
DNA (585bp) protein (195aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B743DA rbh
Glutathione S-transferase domain protein {ECO:0000313|EMBL:ADN61249.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
SCNpilot_cont_500_bf_scaffold_3473_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9944..10939)
DNA (996bp) protein (332aa)
yvbT; alkanal monooxygenase (FMN-linked) (EC:1.14.14.3)
luciferase n=1 Tax=Dietzia alimentaria RepID=UPI00029B28ED
Alkanal monooxygenase-like protein {ECO:0000313|EMBL:EYF06018.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Displaying 15 items

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