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SCNpilot_cont_500_bf_scaffold_2343

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2343_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..245
DNA (243bp) protein (81aa)
Insertion sequence transposase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLP5_AGRRK
insertion sequence transposase; K07497 putative transposase
Insertion sequence transposase protein {ECO:0000313|EMBL:ACM30781.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_500_bf_scaffold_2343_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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444..1064
DNA (621bp) protein (207aa)
Putative insertion sequence transposase protein n=2 Tax=Rhizobium RepID=Q8KKR5_RHIEC
insertion sequence transposase protein
Insertion sequence transposase {ECO:0000313|EMBL:KEC70893.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
SCNpilot_cont_500_bf_scaffold_2343_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1796..2605
DNA (810bp) protein (270aa)
Putative polysaccharide ABC exporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXS4_RHITR rbh
putative polysaccharide ABC exporter, permease protein rbh
Putative polysaccharide ABC exporter, permease protein {ECO:0000313|EMBL:AGB74964.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2343_4
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2655..3395)
DNA (741bp) protein (247aa)
Putative Glycosyltransferase n=1 Tax=Ralstonia solanacearum RepID=D8N0Z0_RALSL
glycosyltransferase
Putative Glycosyltransferase {ECO:0000313|EMBL:CBJ35292.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
SCNpilot_cont_500_bf_scaffold_2343_5
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3370..5271)
DNA (1902bp) protein (634aa)
Hypothethical protein, Glycosyltransferase domain n=1 Tax=Ralstonia solanacearum RepID=D8N0Y9_RALSL rbh
group 1 glycosyl transferase rbh
Hypothethical protein, Glycosyltransferase domain {ECO:0000313|EMBL:CBJ35291.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
SCNpilot_cont_500_bf_scaffold_2343_6
unknown

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comp(5271..5474)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2343_7
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

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comp(5419..7662)
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000362B208
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ELS04913.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2343_8
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7722..8531)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003710E52
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADU13925.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCNpilot_cont_500_bf_scaffold_2343_9
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8528..9292)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003618368
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU13926.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCNpilot_cont_500_bf_scaffold_2343_10
Fusarium verticillioides, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

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comp(9295..10383)
DNA (1089bp) protein (363aa)
Predicted protein n=1 Tax=Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) RepID=C9SB58_VERA1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWG50831.1}; TaxID=334819 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium fujikuroi species complex.;" source="Gibberella moniliformis (strain M3125 / FGSC 7600) (Maize ear and; stalk rot fungus) (Fusarium verticillioides).;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2343_11
unknown

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comp(10448..10984)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2343_12
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10974..13211)
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FXU0_BURVI rbh
Uncharacterized protein {ECO:0000313|EMBL:KFG70027.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2343_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13693..14235)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S772_RHIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS25785.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
Displaying 13 items

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