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SCNpilot_cont_500_bf_scaffold_2654

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2654_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2654_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(144..2243)
DNA (2100bp) protein (700aa)
Elongation factor G n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL91_RHITR rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
translation elongation factor G rbh
SCNpilot_cont_500_bf_scaffold_2654_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2274..2744)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHI5_RHITR rbh
rpsG; 30S ribosomal protein S7 rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_4
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2827..3198)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=30 Tax=Rhizobiales RepID=RS12_AGRRK
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_cont_500_bf_scaffold_2654_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3707..4000
DNA (294bp) protein (98aa)
Two component response regulator n=2 Tax=Rhizobium RepID=L0LJH8_RHITR
two component response regulator
Two component response regulator {ECO:0000313|EMBL:AGB70876.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4122..7337)
DNA (3216bp) protein (1072aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLC0_RHITR rbh
rpoC; DNA-directed RNA polymerase, beta' subunit rbh
SCNpilot_cont_500_bf_scaffold_2654_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7759..8187
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UY44_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN85686.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_500_bf_scaffold_2654_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8347..12489)
DNA (4143bp) protein (1381aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
DNA-directed RNA polymerase subunit beta n=9 Tax=Rhizobium/Agrobacterium group RepID=L0LL86_RHITR rbh
rpoB; DNA-directed RNA polymerase, beta subunit rbh
SCNpilot_cont_500_bf_scaffold_2654_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12752..13132)
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U5X9_9RHIZ
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
rplL; 50S ribosomal protein L7/L 12
SCNpilot_cont_500_bf_scaffold_2654_10
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13191..13709)
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=2 Tax=Rhizobium RepID=L0LI07_RHITR rbh
rplJ; 50S ribosomal protein L10 rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
SCNpilot_cont_500_bf_scaffold_2654_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14042..14740)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJH2_RHITR rbh
rplA; 50S ribosomal protein L 1 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14745..15176)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLB5_RHITR
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15389..15919)
DNA (531bp) protein (177aa)
Transcription termination/antitermination protein NusG n=2 Tax=Rhizobium RepID=L0LL80_RHITR rbh
nusG; transcription termination/antitermination factor NusG rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_500_bf_scaffold_2654_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15938..16138)
DNA (201bp) protein (67aa)
Protein translocase subunit SecE n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHH3_RHITR
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_trna_1
unknown

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comp(16338..16410)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2654_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16620..17507)
DNA (888bp) protein (296aa)
3-deoxy-manno-octulosonate cytidylyltransferase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI01_RHITR rbh
3-deoxy-manno-octulosonate cytidylyltransferase protein rbh
3-deoxy-manno-octulosonate cytidylyltransferase protein {ECO:0000313|EMBL:AGB70867.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17504..18190)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJG9_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB70866.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18517..19410)
DNA (894bp) protein (298aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLB1_RHITR rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AGB70865.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19566..20081
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL76_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB70864.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20110..20619)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHG8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70863.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2654_20
unknown

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comp(20691..20768)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 21 items

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