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SCNpilot_cont_500_bf_scaffold_2

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Displaying items 1-30 of 770 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2_1
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..326
DNA (324bp) protein (108aa)
Bifunctional protein FolD n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PYN5_9RHIZ
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
bifunctional protein FolD
SCNpilot_cont_500_bf_scaffold_2_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(323..1351)
DNA (1029bp) protein (343aa)
Transcriptional regulator protein, LacI family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFF2_RHITR rbh
transcriptional regulator protein, LacI family rbh
Transcriptional regulator protein, LacI family {ECO:0000313|EMBL:AGB70108.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1662..3023
DNA (1362bp) protein (454aa)
Alpha-glucoside ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ58_RHITR rbh
alpha-glucoside ABC transporter, substrate-binding protein rbh
Alpha-glucoside ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB70109.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3149..4165
DNA (1017bp) protein (339aa)
Alpha-glucoside ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ88_RHITR rbh
alpha-glucoside ABC transporter, permease protein rbh
Alpha-glucoside ABC transporter, permease protein {ECO:0000313|EMBL:AGB70110.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4167..5321
DNA (1155bp) protein (385aa)
Alpha-glucoside ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHE6_RHITR rbh
alpha-glucoside ABC transporter, permease protein rbh
Alpha-glucoside ABC transporter, permease protein {ECO:0000313|EMBL:AGB70111.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5358..7010
DNA (1653bp) protein (551aa)
Putative oligo-1,6-glucosidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ6_RHITR rbh
putative oligo-1,6-glucosidase rbh
Putative oligo-1,6-glucosidase {ECO:0000313|EMBL:AGB70112.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7033..8121
DNA (1089bp) protein (363aa)
Lactose transport ATP-binding protein LacK n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFF6_RHITR rbh
lactose transport ATP-binding protein LacK rbh
Lactose transport ATP-binding protein LacK {ECO:0000313|EMBL:AGB70113.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8252..8665
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J9A9_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEA05294.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_500_bf_scaffold_2_9
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8728..9357)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000365B119 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ30581.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2_10
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9534..10904)
DNA (1371bp) protein (457aa)
Ser/Thr protein phosphatase n=1 Tax=Rhizobium radiobacter RepID=UPI000366A693 rbh
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KJF71556.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Ser/Thr protein phosphatase rbh
SCNpilot_cont_500_bf_scaffold_2_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10984..12741)
DNA (1758bp) protein (586aa)
Phosphogluconate dehydratase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ8_RHITR rbh
edd; phosphogluconate dehydratase rbh
Phosphogluconate dehydratase {ECO:0000313|EMBL:AGB70117.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12908..13606)
DNA (699bp) protein (233aa)
6-phosphogluconolactonase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFG1_RHITR rbh
pgl; 6-phosphogluconolactonase rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:AGB70118.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13621..15096)
DNA (1476bp) protein (492aa)
zwf; glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] rbh
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UFA9_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15229..16527)
DNA (1299bp) protein (433aa)
FAD dependent oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ95_RHITR rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AGB70120.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16540..17889)
DNA (1350bp) protein (450aa)
Glutamine synthetase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6R4_9RHIZ rbh
Glutamine synthetase protein {ECO:0000313|EMBL:ENN88861.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
glutamine synthetase protein rbh
SCNpilot_cont_500_bf_scaffold_2_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18114..19295
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LG03_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB70122.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19368..19880
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UFB3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88863.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ankyrin repeat protein off7 (synthetic construct)
SCNpilot_cont_500_bf_scaffold_2_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20049..20192
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ70_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70124.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20517..23054
DNA (2538bp) protein (846aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ99_RHITR rbh
methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGB70125.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23030..23287)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4Q9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88865.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_500_bf_scaffold_2_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23376..24248
DNA (873bp) protein (291aa)
Putative transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6S0_9RHIZ rbh
Putative transcription regulator protein {ECO:0000313|EMBL:ENN88866.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator, LysR family rbh
SCNpilot_cont_500_bf_scaffold_2_22
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24286..25284)
DNA (999bp) protein (333aa)
Putative oxidoreductase n=1 Tax=termite gut metagenome RepID=S0DEN5_9ZZZZ rbh
Putative oxidoreductase {ECO:0000313|EMBL:ETY76041.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
aldo/keto reductase rbh
SCNpilot_cont_500_bf_scaffold_2_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25614..26711
DNA (1098bp) protein (366aa)
Putrescine-binding periplasmic protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LG07_RHITR rbh
putative putrescine ABC transporter, substrate-binding protein rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26897..28039
DNA (1143bp) protein (381aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Putative putrescine ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFG8_RHITR rbh
putative putrescine ABC transporter, ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28042..28953
DNA (912bp) protein (304aa)
Putative putrescine ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ74_RHITR rbh
putative putrescine ABC transporter, permease protein rbh
Putative putrescine ABC transporter, permease protein {ECO:0000313|EMBL:AGB70129.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28957..29772
DNA (816bp) protein (272aa)
Putative putrescine ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJA4_RHITR rbh
putative putrescine ABC transporter, permease protein rbh
Putative putrescine ABC transporter, permease protein {ECO:0000313|EMBL:AGB70130.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29788..31650)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHG3_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB70131.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_28
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31853..33805
DNA (1953bp) protein (651aa)
Acetoacetate-CoA ligase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LG09_RHITR rbh
acetoacetate-CoA ligase rbh
Acetoacetate-CoA ligase {ECO:0000313|EMBL:AGB70132.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34074..36080
DNA (2007bp) protein (669aa)
ATP-dependent RNA helicase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UFC4_9RHIZ rbh
ATP-dependent RNA helicase protein {ECO:0000313|EMBL:ENN88873.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
DEAD/DEAH box helicase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_2_30
unknown

Not on your lists

comp(36082..36672)
DNA (591bp) protein (197aa)

This feature has no annotations

Displaying items 1-30 of 770 in total

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