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SCNpilot_cont_500_bf_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 1019 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9_1
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67..381
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T130_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ31233.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_500_bf_scaffold_9_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(567..1238)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D108B rbh
Uncharacterized protein {ECO:0000313|EMBL:EJJ30067.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9_3
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1499..2128
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BZC2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ09803.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_9_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2179..4041)
DNA (1863bp) protein (621aa)
Putative ATP-dependent hydrolase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UBB1_9RHIZ rbh
Putative ATP-dependent hydrolase protein {ECO:0000313|EMBL:ENN89819.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ATP-dependent Zn protease rbh
SCNpilot_cont_500_bf_scaffold_9_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4505..4816
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7L1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89820.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
helix-turn-helix protein
SCNpilot_cont_500_bf_scaffold_9_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5258..5461
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJX2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71532.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5763..6782
DNA (1020bp) protein (340aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJF0_RHITR rbh
transcriptional regulator, AraC family rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGB71533.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6823..8154)
DNA (1332bp) protein (444aa)
Two component response regulator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN51_RHITR rbh
two component response regulator rbh
Two component response regulator {ECO:0000313|EMBL:AGB71534.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8349..9170)
DNA (822bp) protein (274aa)
Two-component response regulator protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN88_RHITR rbh
two-component response regulator protein rbh
Two-component response regulator protein {ECO:0000313|EMBL:AGB71535.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9328..11922)
DNA (2595bp) protein (865aa)
Small-conductance mechanosensitive channel n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLF1_RHITR rbh
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AGB71536.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
small-conductance mechanosensitive channel rbh
SCNpilot_cont_500_bf_scaffold_9_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12204..13220)
DNA (1017bp) protein (339aa)
Hemin transport system permease protein HmuU n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QHV3_9RHIZ rbh
Transmembrane permease component of heme ABC transporter {ECO:0000313|EMBL:AHK44688.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Fe3+ ABC transporter permease; K02015 iron complex transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_9_12
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13283..14242)
DNA (960bp) protein (320aa)
ABC transporter substrate binding protein (Iron) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K021_AGRVS rbh
ABC transporter substrate binding protein (iron); K02016 iron complex transport system substrate-binding protein rbh
ABC transporter substrate binding protein (Iron) {ECO:0000313|EMBL:ACM38219.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_9_13
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14263..15042)
DNA (780bp) protein (260aa)
ABC transporter nucleotide binding/ATPase (iron); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7I4_9RHIZ
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDP76271.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_cont_500_bf_scaffold_9_14
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15052..15465)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7I5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS51255.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15981..17396)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJX8_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB71537.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18111..19328
DNA (1218bp) protein (406aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN56_RHITR rbh
acyl-CoA dehydrogenase rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB71539.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19351..19818)
DNA (468bp) protein (156aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN91_RHITR
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AGB71540.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20025..21485)
DNA (1461bp) protein (487aa)
FAD dependent oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLF6_RHITR rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AGB71541.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_19
unknown

Not on your lists

21791..21895
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9_20
unknown

Not on your lists

22109..22915
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23091..23213
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJG2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71543.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23390..23686
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN63_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71544.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_23
unknown

Not on your lists

23933..24121
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9_trna_7
unknown

Not on your lists

comp(24362..24434)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_9_24
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24559..25488)
DNA (930bp) protein (310aa)
Putative phenazine antibiotic biosynthesis protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4W5_9RHIZ rbh
Putative phenazine antibiotic biosynthesis protein {ECO:0000313|EMBL:ENN87649.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
phenazine biosynthesis protein PhzF family rbh
SCNpilot_cont_500_bf_scaffold_9_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25545..26285)
DNA (741bp) protein (247aa)
Nudix hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJY8_RHITR rbh
nudix hydrolase rbh
Nudix hydrolase {ECO:0000313|EMBL:AGB71547.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26282..27397)
DNA (1116bp) protein (372aa)
Putative endonuclease/exonuclease/phosphatase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJG7_RHITR rbh
putative endonuclease/exonuclease/phosphatase rbh
Putative endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AGB71548.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_9_27
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27446..28441)
DNA (996bp) protein (332aa)
2OG-Fe(II) oxygenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V9G6_9RHIZ rbh
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ENN87652.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
oxidoreductase, 2OG-Fe(II) oxygenase family rbh
SCNpilot_cont_500_bf_scaffold_9_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28519..29550)
DNA (1032bp) protein (344aa)
Iron(III) ABC transporter, ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UBX9_9RHIZ rbh
Iron(III) ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ENN87653.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Fe(3+) ABC transporter, ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_9_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29538..31232)
DNA (1695bp) protein (565aa)
Molybdenum (Or ferric iron) transport system permease protein ModB n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U4X1_9RHIZ rbh
Molybdenum (Or ferric iron) transport system permease protein ModB {ECO:0000313|EMBL:ENN87654.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Fe(3+) ABC transporter, permease protein rbh
Displaying items 1-30 of 1019 in total

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