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SCNpilot_cont_500_bf_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 290 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_24_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_24_2
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103..2544)
DNA (2442bp) protein (814aa)
glycine cleavage system T protein; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4] rbh
Glycine cleavage system T protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLT4_AGRRK rbh
Putative dimethylglycine oxidase {ECO:0000313|EMBL:GAJ92002.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_cont_500_bf_scaffold_24_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2739..3578
DNA (840bp) protein (280aa)
Transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8L9_9RHIZ rbh
Transcription regulator protein {ECO:0000313|EMBL:ENN86558.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator protein rbh
SCNpilot_cont_500_bf_scaffold_24_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3575..4858)
DNA (1284bp) protein (428aa)
Oxidoreductase protein OrdL n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6B3_9RHIZ rbh
Oxidoreductase protein OrdL {ECO:0000313|EMBL:ENN86557.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative oxidoreductase
SCNpilot_cont_500_bf_scaffold_24_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4888..6033)
DNA (1146bp) protein (382aa)
Oxidoreductase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JLE7_AGRRK rbh
oxidoreductase rbh
Oxidoreductase protein {ECO:0000313|EMBL:ACM28646.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_500_bf_scaffold_24_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6063..6797)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UY31_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN86555.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_24_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6863..7702)
DNA (840bp) protein (280aa)
Amino acid ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JLE5_AGRRK rbh
amino acid ABC transporter rbh
Amino acid ABC transporter {ECO:0000313|EMBL:KEA03726.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_500_bf_scaffold_24_8
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7727..8389)
DNA (663bp) protein (221aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. AP16 RepID=J2DDC6_9RHIZ rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJK87939.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
amino acid ABC transporter rbh
SCNpilot_cont_500_bf_scaffold_24_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8389..9033)
DNA (645bp) protein (215aa)
Amino acid ABC transporter permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6A6_9RHIZ rbh
Amino acid ABC transporter permease protein {ECO:0000313|EMBL:ENN86552.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
amino acid ABC transporter rbh
SCNpilot_cont_500_bf_scaffold_24_10
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9030..9977)
DNA (948bp) protein (316aa)
amino acid ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
Amino acid ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JLE2_AGRRK rbh
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:EJK87937.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_500_bf_scaffold_24_11
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(10118..10648)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00037A663F
Arylsulfatase A and related enzymes
Tax=RBG_13_Spirochaetes_68_11_curated
SCNpilot_cont_500_bf_scaffold_24_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11065..12138
DNA (1074bp) protein (358aa)
NMT1-like family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LX99_RHITR rbh
NMT1-like family protein rbh
NMT1-like family protein {ECO:0000313|EMBL:AGB75336.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_24_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12196..13014
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVS0_RHITR rbh
ABC transporter, permease protein rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AGB75337.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_24_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13011..13832
DNA (822bp) protein (274aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVM1_RHITR rbh
ABC transporter, ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB75338.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_24_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13835..14653
DNA (819bp) protein (273aa)
Urea carboxylase-associated protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYX0_RHITR rbh
urea carboxylase-associated protein rbh
Urea carboxylase-associated protein {ECO:0000313|EMBL:AGB75339.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_24_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14669..15319
DNA (651bp) protein (217aa)
Urea carboxylase-associated protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZ07_RHITR rbh
urea carboxylase-associated protein rbh
Urea carboxylase-associated protein {ECO:0000313|EMBL:AGB75340.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_24_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15321..18857
DNA (3537bp) protein (1179aa)
Urea carboxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXA4_RHITR rbh
uca; urea carboxylase rbh
Urea carboxylase {ECO:0000313|EMBL:AGB75341.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_24_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18857..20668
DNA (1812bp) protein (604aa)
Allophanate hydrolase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVS4_RHITR rbh
allophanate hydrolase rbh
Allophanate hydrolase {ECO:0000313|EMBL:AGB75342.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_24_19
unknown

Not on your lists

20681..20809
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_24_20
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21102..23156)
DNA (2055bp) protein (685aa)
Short-chain dehydrogenase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YR48_9RHIZ rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ERI14542.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
short chain dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_24_21
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23383..24363
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XIZ2_9RHIZ rbh
Sorbitol operon regulator {ECO:0000313|EMBL:EEQ94396.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
DeoR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_24_22
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24397..25341)
DNA (945bp) protein (315aa)
Ribokinase-like domain-containing protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JN08_9RHIZ rbh
Ribokinase-like domain-containing protein {ECO:0000313|EMBL:ELT48470.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
ribokinase-like domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_24_23
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25412..26443)
DNA (1032bp) protein (344aa)
Monosaccharide-transporting ATPase n=2 Tax=Ochrobactrum intermedium RepID=C4WQ52_9RHIZ rbh
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EEQ94395.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
monosaccharide-transporting ATPase; K02057 simple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_24_24
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26440..28008)
DNA (1569bp) protein (523aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KC56_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:EMG52765.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
SCNpilot_cont_500_bf_scaffold_24_25
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28101..29099)
DNA (999bp) protein (333aa)
LacI family transcription regulator n=1 Tax=Ochrobactrum anthropi RepID=UPI000289F923 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EXL02750.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
periplasmic binding protein/LacI transcriptional regulator; K02058 simple sugar transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_24_26
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29190..30179)
DNA (990bp) protein (330aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ABS16767.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ABS16767.1};; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Monosaccharide-transporting ATPase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X6B3_OCHA4 rbh
monosaccharide-transporting ATPase; K02057 simple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_24_27
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30376..30606
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK69657.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
SCNpilot_cont_500_bf_scaffold_24_28
unknown

Not on your lists

30786..31010
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_24_29
Pseudomonas sp. GM18, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30968..31933)
DNA (966bp) protein (322aa)
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM18 RepID=J2NUX8_9PSED rbh
Transcriptional regulator {ECO:0000313|EMBL:EJM21401.1}; Flags: Precursor;; TaxID=1144324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM18.;"
LysR family regulatory protein
SCNpilot_cont_500_bf_scaffold_24_30
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32038..33240
DNA (1203bp) protein (401aa)
mandelate racemase/muconate lactonizing protein; K01706 glucarate dehydratase [EC:4.2.1.40]
Mandelate racemase/muconate lactonizing protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YD13_MESOW
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AEH90120.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying items 1-30 of 290 in total

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