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SCNpilot_cont_500_bf_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 235 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_50_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2154)
DNA (2154bp) protein (718aa)
FhuA-like outer membrane siderophore receptor n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXT1_RHITR rbh
FhuA-like outer membrane siderophore receptor rbh
FhuA-like outer membrane siderophore receptor {ECO:0000313|EMBL:AGB74935.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_50_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2454..3356
DNA (903bp) protein (301aa)
IroE-like esterase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW50_RHITR rbh
IroE-like esterase rbh
IroE-like esterase {ECO:0000313|EMBL:AGB74936.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_50_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3613..4596
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUM6_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB74937.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_50_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4657..6846
DNA (2190bp) protein (730aa)
Cellulose synthase catalytic subunit (UDP-forming) n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUH0_RHITR rbh
celA; cellulose synthase catalytic subunit (UDP-forming) rbh
Cellulose synthase catalytic subunit (UDP-forming) {ECO:0000313|EMBL:AGB74938.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_50_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6846..9347
DNA (2502bp) protein (834aa)
Cellulose synthase protein CelB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXQ0_RHITR rbh
Cellulose synthase protein CelB {ECO:0000313|EMBL:AGB74939.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
celB; cellulose synthase protein CelB rbh
SCNpilot_cont_500_bf_scaffold_50_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9344..10393
DNA (1050bp) protein (350aa)
Cellulase n=3 Tax=Rhizobium tropici RepID=L0LXT5_RHITR rbh
celC; cellulase rbh
Cellulase {ECO:0000313|EMBL:AGB74940.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_50_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10384..12771
DNA (2388bp) protein (796aa)
Cellulose synthesis protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW55_RHITR rbh
cellulose synthesis protein rbh
Cellulose synthesis protein {ECO:0000313|EMBL:AGB74941.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_50_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13042..14571
DNA (1530bp) protein (510aa)
Galactarate dehydratase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXW0_9RHIZ rbh
Galactarate dehydratase {ECO:0000313|EMBL:ENN85586.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
D-galactarate dehydratase (GalcD) rbh
SCNpilot_cont_500_bf_scaffold_50_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14584..15579)
DNA (996bp) protein (332aa)
Putative HTH-type transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXR0_9RHIZ rbh
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:ENN85541.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator, GntR-family rbh
SCNpilot_cont_500_bf_scaffold_50_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15812..16453)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U838_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN88729.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
RibD C-terminal domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_50_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16598..16954
DNA (357bp) protein (119aa)
ArsR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036E4CBD
Putative transcriptional regulator {ECO:0000313|EMBL:ENN88728.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_50_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16938..17417
DNA (480bp) protein (160aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIU4_RHITR rbh
activator of Hsp90 ATPase 1 family protein rbh
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AGB70616.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_50_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17778..19376
DNA (1599bp) protein (533aa)
ABC transport system periplasmic binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VAY4_9RHIZ rbh
ABC transport system periplasmic binding protein {ECO:0000313|EMBL:ENN88222.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
dppA; dipeptide ABC transporter substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_50_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19373..20386
DNA (1014bp) protein (338aa)
Dipeptide transport system permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UDH5_9RHIZ rbh
Dipeptide transport system permease protein {ECO:0000313|EMBL:ENN88223.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
dppB; dipeptide ABC transporter transmembrane protein; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_50_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20386..21285
DNA (900bp) protein (300aa)
cytochrome C550 n=1 Tax=Rhizobium radiobacter RepID=UPI00036B4364 rbh
Cytochrome C550 {ECO:0000313|EMBL:EPR20758.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
dppC; dipeptide ABC transporter transmembrane protein; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_50_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21289..22116
DNA (828bp) protein (276aa)
Dipeptide transport ATP-binding protein DppD n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2X2_9RHIZ rbh
Dipeptide transport ATP-binding protein DppD {ECO:0000313|EMBL:ENN88225.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
dppD1; dipeptide ABC transporter, ATP-binding component rbh
SCNpilot_cont_500_bf_scaffold_50_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22113..22862
DNA (750bp) protein (250aa)
Oligopeptide transport ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V505_9RHIZ rbh
Oligopeptide transport ATP-binding protein {ECO:0000313|EMBL:ENN88226.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
dppF; ABC transporter nucleotide binding/ATPase (dipeptide); K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_50_18
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22883..23257
DNA (375bp) protein (125aa)
beta-lactamase (EC:3.4.16.4)
Penicillin binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VAY7_9RHIZ
Penicillin binding protein {ECO:0000313|EMBL:ENN88227.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_500_bf_scaffold_50_19
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23254..24324
DNA (1071bp) protein (357aa)
Penicillin binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VAY7_9RHIZ rbh
Penicillin binding protein {ECO:0000313|EMBL:ENN88227.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Penicillin-binding protein, beta-lactamase class C rbh
SCNpilot_cont_500_bf_scaffold_50_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24394..25278
DNA (885bp) protein (295aa)
Putative DNA-binding protein transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UDI1_9RHIZ rbh
Putative DNA-binding protein transcriptional regulator {ECO:0000313|EMBL:ENN88228.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_50_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25302..26168)
DNA (867bp) protein (289aa)
dat; D-amino acid aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21] rbh
D-alanine aminotransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U6K4_9RHIZ rbh
D-alanine aminotransferase {ECO:0000313|EMBL:ENN88229.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_500_bf_scaffold_50_22
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26205..27251)
DNA (1047bp) protein (349aa)
aminopeptidase; K01266 D-aminopeptidase [EC:3.4.11.19] rbh
Aminopeptidase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2X6_9RHIZ rbh
Aminopeptidase {ECO:0000313|EMBL:ENN88230.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_500_bf_scaffold_50_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27883..28296
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3S0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88510.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_50_24
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28690..28995
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0H1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84607.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_50_25
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29048..29842)
DNA (795bp) protein (265aa)
YdjC family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7X3_MESOW
YdjC family protein; K03478 hypothetical protein
YdjC family protein {ECO:0000313|EMBL:AEH86355.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_50_26
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29842..30792)
DNA (951bp) protein (317aa)
UPI0003CF80FA related cluster n=1 Tax=unknown RepID=UPI0003CF80FA
Sugar transferase {ECO:0000313|EMBL:ESY67588.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
family 2 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_50_27
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31019..32494
DNA (1476bp) protein (492aa)
Putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVW2_POLGS
4-amino-4-deoxy-L-arabinose transferase
Putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family {ECO:0000313|EMBL:ADZ69219.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_50_28
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32533..33843)
DNA (1311bp) protein (437aa)
ABC transporter nucleotide binding/ATPase protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K161_AGRVS rbh
ABC transporter ATPase; K02049 NitT/TauT family transport system ATP-binding protein rbh
ABC transporter nucleotide binding/ATPase protein {ECO:0000313|EMBL:ACM38609.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_50_29
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33874..35607)
DNA (1734bp) protein (578aa)
ABC-type anion transport system, duplicated permease component n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K162_AGRVS rbh
ABC-type anion transport system, duplicated permease component; K02050 NitT/TauT family transport system permease protein rbh
ABC-type anion transport system, duplicated permease component {ECO:0000313|EMBL:ACM38610.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_50_30
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36035..36907
DNA (873bp) protein (291aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Rhizobium sp. CF142 RepID=J2L8U5_9RHIZ rbh
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EJJ29464.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein; K06889 rbh
Displaying items 1-30 of 235 in total

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